Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01520 ATGCGCACACTAGCGGCTCATTTCTCCAACTATTTATGTAGAAGACGAGTTGGTGTCAATCAACAATATCGTAATTTTTCATCTTCTAATAGCAAAGATGAGCTAGCCCTGGAAGGAGAAGTTGAGAGAAAATTTGGGTGGTTATTGAAGACTCTATTTTTCGGGAGTGCAATTTATGCAGGATACCAGTTCTTTCCTTATATGGGGGAAAATTTGATGCAACAGTCAGTATCTCTTTTGCGTGTGAAGGATCCCTTGTTCAAAAGGATGGGAGCTTCTAGATTGGCCCGTTTTGCAAAAGATGATGAAAGCAGGATGAAGATACTTGAGATGGGTGGAGTTGAAGAGCTCATAAATATGTTAAGCACGGCTAAAGATGACCGTACACGGAAAGCAGCACTGAACGCTCTGGCTGAGCTATCACACTCAGATGAAGTTCTTGCATCCTTGCATCGTGCTGGGGGCATTCCAGTTATTAGGTCTGCTCCAAGTTCACTTGAGGATGCAGATGTTGAGAGATTCAAGTTGAGCTTGATGAAAAGGTTCCAAGATCTTAAGTATGATGTGTCTTCATGA 576 0.4219 MRTLAAHFSNYLCRRRVGVNQQYRNFSSSNSKDELALEGEVERKFGWLLKTLFFGSAIYAGYQFFPYMGENLMQQSVSLLRVKDPLFKRMGASRLARFAKDDESRMKILEMGGVEELINMLSTAKDDRTRKAALNALAELSHSDEVLASLHRAGGIPVIRSAPSSLEDADVERFKLSLMKRFQDLKYDVSS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01520 191 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 112 155 IPR000225 GO:0005515
Car05g01520 191 Pfam Armadillo/beta-catenin-like repeat 101 141 IPR000225 GO:0005515
Car05g01520 191 Gene3D - 67 172 IPR011989 -
Car05g01520 191 SMART arm_5 101 142 IPR000225 GO:0005515
Car05g01520 191 SUPERFAMILY ARM repeat 75 165 IPR016024 -
Car05g01520 191 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 191 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01520 - - gmx:100527372 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01520 05 59592496 59595449 Car05g01520 05 59592496 59595449 ECH