Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01517 ATGATTCCAGTTGATAATGGCATTACAAATCCCGAAGATGAAATTCAAGAATGTAATGGGACTCAAGTGAAGGAGTTTTCTTCTATAGATATTTCAACTTCAACAAAATCATCTCCAGGCACTGAAAATCCTAGCAGAAAGTTCCTCAATTTTGGTTCTGCGCCTGCCAAATTCAAGCATCTCACTACAGTCAAAGACCAGGTTTCACAGTCTGTTCCTTCTCCGCTTTCCAATAGCCTAAAAGTGCGTTTCAATGCTATGTTCGCTCAGAAACTTGAATGGAGTTCAATCAAGAAAATGTGCCAGGAATGGATCAGAAACCCAATGAACATGGCCCTTTTTGCGTGGATAATCTGTGTCGCTGTTTCGGGCGCCATTCTGTTCTTTGTCATGACAGGAATGCTGAATGGTGTGCTAAAAACTAAGTCAGAGAGGCACACATGGTTTGAAATCAATAACCAAATATTAAATGCACTCTTTACACTGATGTGTTTGTATCAACATCCAAAGAGGTTCTATCATCTTGTTCTATTGTGCAGATGGAGACCAAATGACATTTCTAGACTTAGAATGATTTACTGCAAAAATGGAACTTATAAGCCTAATGAATGGACACATATGATGGTAGTAGTTATTCTTCTTCATTTAAATTGTTTTGCTCAATATGCACTTTGTGGTCTAAATTTGGGATATAAAAGGTCTCAGAGACCTGCTGTTGGAGTTGGAATTACTATTTCCTTTTCAATTGCTGCACCTGCAATAGCTGGTTTGTACACTATTCTTAGTCCACTTGGGAAGGACTATGATTGTGAGATTGATGAAGAATCACAAGTTCAAATTACTTCTTCTCATGAAAGGAAAGAGCATGTTAGAGAGAAACCATTGGAGAAAAAATATGCATTTGCATCCAAAGATCAACAAGGGGTTATAGAGAATAAACCAAATTGGAGTGGAGGAATACTTGACATATGGAAAGATATTTCATTAGCTTATCTCTCACTTTTCTGCACTTTTTGTGTGTTTGGGTGGAATATGGAGAGACTTGGTTTTGGGAACATGTATGTTCATATAGCTACTTTTATGCTGTTTTGTATGGCTCCTTTTTGGATTTTTGTATTGGCTTCGGTTAACATTGATGATGACAGTGTTAGACAGGGTCTTGTAGCTGTTGGAATCATTCTTTGTTTTTGTGGTTTACTTTATGGTGGGTTTTGGAGGATTCAAATGAGAAAGAGGTTCAATTTGCCTAACTATGAATTCTGTTTTGGAAAGTCATCAGTTTCTGATTGCACACTTTGGTTATGCTGTTGTTGGTGCTCTCTTGCTCAAGAAGCTAGGACTGCAAACAGTTATGATCTTGTGGAAGATAAGTTATTGTGCATGAAAGAAATTGATACTAGGGAAGATGTAGAGTCAACCAAATCTTCTTCTTCTAATACTGTTAGTTCAAGCAATGCCTTAAAGGGGTGTGGTAGTCCTGATAATAGGTCTCTATTTAGTGTAAAAGAAGAACATTTTGAGAGAGGTAAAGATGGAACAATGATTCCTCCAACTCCAACATTAATACAAAAAGATGCTCCTTAG 1584 0.3731 MIPVDNGITNPEDEIQECNGTQVKEFSSIDISTSTKSSPGTENPSRKFLNFGSAPAKFKHLTTVKDQVSQSVPSPLSNSLKVRFNAMFAQKLEWSSIKKMCQEWIRNPMNMALFAWIICVAVSGAILFFVMTGMLNGVLKTKSERHTWFEINNQILNALFTLMCLYQHPKRFYHLVLLCRWRPNDISRLRMIYCKNGTYKPNEWTHMMVVVILLHLNCFAQYALCGLNLGYKRSQRPAVGVGITISFSIAAPAIAGLYTILSPLGKDYDCEIDEESQVQITSSHERKEHVREKPLEKKYAFASKDQQGVIENKPNWSGGILDIWKDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFVLASVNIDDDSVRQGLVAVGIILCFCGLLYGGFWRIQMRKRFNLPNYEFCFGKSSVSDCTLWLCCCWCSLAQEARTANSYDLVEDKLLCMKEIDTREDVESTKSSSSNTVSSSNALKGCGSPDNRSLFSVKEEHFERGKDGTMIPPTPTLIQKDAP 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01517 527 Pfam Protein of unknown function (DUF2985) 103 181 IPR021369 -
Car05g01517 527 Pfam PLAC8 family 316 446 IPR006461 -
Car05g01517 527 MobiDBLite consensus disorder prediction 473 491 - -
Car05g01517 527 MobiDBLite consensus disorder prediction 471 527 - -
Car05g01517 527 PANTHER PLAC8 FAMILY PROTEIN-RELATED 51 469 - -
Car05g01517 527 PANTHER - 51 469 - -
Car05g01517 527 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 315 449 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01517 Car-Chr5 59547484 59550278 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01517 - - gmx:100811964 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01749 02 46613847 46616602 Car05g01517 05 59547484 59550278 ECH
Car05g01517 05 59547484 59550278 Car05g01517 05 59547484 59550278 ECH
Car05g01517 05 59547484 59550278 Car02g01749 02 46613847 46616602 PCT