Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01516 ATGATAAAACGCCACGTCATCAAACGCAAAAGTCCCAAAGGAATATTTTTTCTCGAACTGGCTAACTCTCAAGGAAGTGGCGAAGACGCTGATTCCAGCAATCAAAAGCTGGTTCTCAAACTTTATGAAGCCTTAAACTCTCGTGATTCCGATACCGTGGTCAATATTTTGGCCTCTGATCTCGAGTGGTGGTTCCACGGTCCACCTTCTCATCAGTTTTTGATGCGTGTGCTCACCGGCGATTCCACCGCCGACGACACTTTCCGGTTCGTTCCTCAGTCACTCGTTTCCTTCGGCTCCACCATTATCGTTGAAGGTTGCGATACTTCACGCGCCATTTCCTGGGTTCACGCGCTTACTGTAGCGGATGGGATAGTCACCCAAGTTAGGGAGTATTTCAACACTTCCCTCACCGTTACACGCTTCGCCGACGTCGAAAAAGACTCCGGTGAAATTGTCCCGGCGGCGCATAATTCCGGTCGTTTCCCTTGTGTTTGGGAGAGTAGCGTCTCCGATCGGGTCGGTAAATCCGTGCCCGGTTTGGTCCTCGCaatataa 558 0.5036 MIKRHVIKRKSPKGIFFLELANSQGSGEDADSSNQKLVLKLYEALNSRDSDTVVNILASDLEWWFHGPPSHQFLMRVLTGDSTADDTFRFVPQSLVSFGSTIIVEGCDTSRAISWVHALTVADGIVTQVREYFNTSLTVTRFADVEKDSGEIVPAAHNSGRFPCVWESSVSDRVGKSVPGLVLAI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01516 185 PANTHER SENESCENCE ASSOCIATED GENE 20 17 185 - -
Car05g01516 185 SUPERFAMILY NTF2-like 33 138 IPR032710 -
Car05g01516 185 Gene3D - 21 145 - -
Car05g01516 185 PANTHER OS07G0691300 PROTEIN 17 185 IPR009798 -
Car05g01516 185 Pfam Wound-induced protein WI12 75 185 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01516 Car-Chr5 59528300 59529016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01516 - - lja:Lj0g3v0040339.1 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01364 03 58704284 58705239 Car05g01516 05 59528300 59529016 ECH
Car02g01414 02 40861030 40861832 Car05g01516 05 59528300 59529016 ECH
Car05g01516 05 59528300 59529016 Car05g01516 05 59528300 59529016 ECH