Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01515 ATGGGAAAATCAGTTGAATCTGTGATTAGGCTTAAAGAATTATCGCGGGTTGTATCATCATCTGCAAAATCCAATAGACCAAAGACAACCCAACCTATATCTCCGAACCGGGTCACCACTCCACGAACCGCGAAACAAGACCGCACTGTTAAGGTGGAACCGCCGAAGAAGATAGAAGCTTTGGAATCTCGAACACCACTCGCCAGGGTGGTCGCTTATTGCTCTAAGCGGTGGTTTCAAGATACACTCAAGGGGGCTAAAGCTGGGGATAGCTCCATGCAAGTTTTGGTTGGTCAAATGTATAATTCTGGCTATGGTGTTCCTCGAGATCCTCAAAAGGGACATGCTTGGATTAGTAGAGCATCAAGAAGTCGAAATTTAGTCTGGAAAGTAAGCGAAAAACAACCAGGTTACAGAGCAAGTGATTCGGATTCATGTGAATTGGAGAACAAATCTACTCCTTAG 465 0.4473 MGKSVESVIRLKELSRVVSSSAKSNRPKTTQPISPNRVTTPRTAKQDRTVKVEPPKKIEALESRTPLARVVAYCSKRWFQDTLKGAKAGDSSMQVLVGQMYNSGYGVPRDPQKGHAWISRASRSRNLVWKVSEKQPGYRASDSDSCELENKSTP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01515 154 Gene3D Tetratricopeptide repeat domain 54 135 IPR011990 GO:0005515
Car05g01515 154 SUPERFAMILY HCP-like 82 122 - -
Car05g01515 154 MobiDBLite consensus disorder prediction 16 50 - -
Car05g01515 154 MobiDBLite consensus disorder prediction 17 43 - -
Car05g01515 154 SMART sel1 91 126 IPR006597 -
Car05g01515 154 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 153 - -
Car05g01515 154 MobiDBLite consensus disorder prediction 133 154 - -
Car05g01515 154 PANTHER EXPRESSED PROTEIN 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01515 Car-Chr5 59497074 59501289 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01515 - - gmx:100779520 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01515 05 59497074 59501289 Car05g01515 05 59497074 59501289 ECH