Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01512 ATGTCATCTTCCCAAAGTCTGAAAATTGGCATAGTTGGGTTTGGCACCTTTGGCCAATTTCTTGCAAATACAATGATCAAACAAGGTCACACTCTAACTGCAACTTCTCGTTCAGATTACTCAAAACTCTGTCTCCAAATGGGTATCCGTTTCTTCAGGGATATCACATCATTCCTTGATGCTGACATGGATGTCATATTGCTATGTACATCTATCTCATCATTATCTGAGGTTGTCGGATCAATGCCACTCAATTGTCTTAAGCGACCAACGCTTTTTGTTGATGTTCTTTCAGTAAAAGAGCACCCAAAGAACCTTCTATTAAGAGTTCTGCGAGAGGAGTCAGACATACTCTGCACGCACCCAATGTTTGGAAAAGTGAGTGGGAAAAGTGGCTGGCAAAATCTGACTTTCATGTATGAGAAAGTTCGAATAAGGGATGAAGTTACCTGCTCTAAATTTCTCCAAATTTTTGCAAGTGAGGGTTGCAAGATGGTAGAAATGTCCTGTGAGGAACATGATAAAGCAGCTGCGAAGAGCCAATTTATCACACACACAATAGGCAGGGCATTGGCAGAAATGGATGTCAAACCCACCCCTATTGACACTAAGGGCTTTCAGGCACTTGTTCAATTGAAAGAACCTGTCATGGGATGTAGTTTTGATCTGTATAGTGGATTATTCATGCACAACAGATTCGCCAGACAGGAGCTGGAAAACCTTGAACATGCCCTACACAAAGTCAAAGAGATGCTGGTCCAAAGGATGAATGAAGGACAGAGCCCAGAAAGAACTGAAAGCTGA 804 0.4204 MSSSQSLKIGIVGFGTFGQFLANTMIKQGHTLTATSRSDYSKLCLQMGIRFFRDITSFLDADMDVILLCTSISSLSEVVGSMPLNCLKRPTLFVDVLSVKEHPKNLLLRVLREESDILCTHPMFGKVSGKSGWQNLTFMYEKVRIRDEVTCSKFLQIFASEGCKMVEMSCEEHDKAAAKSQFITHTIGRALAEMDVKPTPIDTKGFQALVQLKEPVMGCSFDLYSGLFMHNRFARQELENLEHALHKVKEMLVQRMNEGQSPERTES 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01512 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 168 IPR036291 -
Car05g01512 267 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 169 254 IPR008927 -
Car05g01512 267 Pfam Prephenate dehydrogenase, nucleotide-binding domain 33 130 IPR046826 -
Car05g01512 267 Coils Coil 231 258 - -
Car05g01512 267 Gene3D - 1 174 - -
Car05g01512 267 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 7 267 IPR003099 GO:0004665|GO:0006571|GO:0008977
Car05g01512 267 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 4 264 - -
Car05g01512 267 PANTHER AROGENATE DEHYDROGENASE-RELATED 4 264 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01512 Car-Chr5 59479906 59481997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01512 K15227 - gmx:100787362 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01512 05 59479906 59481997 Car05g01512 05 59479906 59481997 ECH