Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01511 ATGAAGCCCAACACTCAGGCTTCTTTCGCCACTGCACCGCCGCACGTGACTTACTTTCACCGCCCAACTGTTTCACGTGCGGCGCCTTCGAATTCTCATCTTCCAACGCCAAACCATAAATTCCGACAATTTCGGACCGCCAAACGCCGCCGTCTTAGCCTCTCCCTCAACCGCTCCAGTCACATCATCGCGGCTCGGAAGCTCGAACATAACGACGTTAACGATGACGTGAGTGAAACCTCGGTTGAACGCGTGGAACATATAGAATTGTCTCGAGCTCGAAGCAGCCGGCGAGGCGTGCTGGTGGCGCCGTTTCTAGCCGCGGGAGCTTCGTTCTTGCTCTCCGCGGCGGCGACGAGGGCGGCAGATGAGGAGACGCCGACGCCGGCGGACATGACGGCTCCAAAGCCGGAGGAGGTGAAGAAGATAGAGGAGGAAGTGATAACGTCGAGGATTTATGATGCGACGGCGATAGGAGAAGCTGAACAGGTTCCGGTTCGAGACGATAAGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAAACGATGTGTTGAAATTGATAAGCGGTTATCTTTGGCTCTTGAAGCGTTTCCATCTGATCTTCAGGAACTACTCAATCAGTATATGGATAAAAAGATAGATGGAGAAACCTTGAAGTCTTATATGGTGCATTGGCCGCCTGAACGATGGCAGGAGTATGAACCTATTCTTAGTTACTGTTGTGAAAATGGAATTCATCTTGTTGCTTGTGGTACTCCACTGAAGATCTTAAGGACTGTCCAAGCAGAAGGAATTAGTGGGCTAACAAAGGCTGAACGTAAGTTATATGCACCTCCAGCTGGTTCAGGCTTCATATCAGGCTTTAATTCTATCTCACGTCGTTATTCAGTTGATAGTACTCCAAATCTGTCGTTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCTAGAGTAGTTGACGAGTATACTATGTCCCAGATCATCTTACAAAATGTGCTTGATGGAGGAGCCACTGGTATGTTAATAGTCGTGACTGGTGCAAGCCATGTCACATATGGATCTAGAGGAACTGGAGTGCCCGCAAGAATTTCAAGAAAAATGCAAAAGAAAAACCAAGTAGTTATATTACTTGACCCAGAAAGACAATTTATTCGCAGTGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGCAGAAACTGCTTTGACCGGGTTGAGATTGCTCGGGTTATGAATGCTGCCGGGCAGAGACGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTATTGCAGAACTTTTTTGATCTAGAGAAGTATCCTCTGCTTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGAGAAAGATTGTTGGCAGATCCCAAATTCTTGCATAGATTAGCCATAGAAGAAGCAATATCAGTAACAACTACATTATTAGCACAATATCAAAAGCGGAAAGAGAACTTCTTTCAAGAGATCGACTATGTTATTACGGATACTGTTAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCGACTTTATCATTTCTTTCCTATGCTGATGACATGAATGCTCCTGACACTCTAATAGGCCTTCTTGGCTCCATCCCAGACAATGCATTTCAGAAGAATCCTGTGGGGACAAATTGGAATCTCAGTCATCGAGTTGCATCAGTTGTATTCGGTGGTCTGAAACTCGCTGGTGTTGGATTTGTTTCAAGCATTGGAGCTGTGGCTTCATCAAATTCTCTATTTGCAGTTCGTAAATTCCTTAGTCCAGCAATCATCGCTGATCAACAGATTGCGAGATCACCAATACTCAAAACCGCAGTTGTTTATGCATGTTTTCTTGGGATATCTGCAAATCTCCGTTATCAGATAATTGCTGGGGTAGTGGAGCATCGGATTTCTGATCAGTTTTCTTCCCAAACATTTCTTGTAAATATGCTATCTTTTGTAGCACGGACAATCAATTCTTATTGGGGAACGCAGCAATGGATTGACCTTGCACGCTCTACCGGACTGCAAAAGAAGCCAGTATTGAGGAGATTAAAAGTGAATGAGGATAAGTCAGTTATCATTCTCGGCTAA 2157 0.452 MKPNTQASFATAPPHVTYFHRPTVSRAAPSNSHLPTPNHKFRQFRTAKRRRLSLSLNRSSHIIAARKLEHNDVNDDVSETSVERVEHIELSRARSSRRGVLVAPFLAAGASFLLSAAATRAADEETPTPADMTAPKPEEVKKIEEEVITSRIYDATAIGEAEQVPVRDDKELELEIVKNLHKRCVEIDKRLSLALEAFPSDLQELLNQYMDKKIDGETLKSYMVHWPPERWQEYEPILSYCCENGIHLVACGTPLKILRTVQAEGISGLTKAERKLYAPPAGSGFISGFNSISRRYSVDSTPNLSFPFGPSSYLSAQARVVDEYTMSQIILQNVLDGGATGMLIVVTGASHVTYGSRGTGVPARISRKMQKKNQVVILLDPERQFIRSEGEVPVADFLWYSAARPCSRNCFDRVEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEKYPLLSELTHRFQGFRERLLADPKFLHRLAIEEAISVTTTLLAQYQKRKENFFQEIDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADDMNAPDTLIGLLGSIPDNAFQKNPVGTNWNLSHRVASVVFGGLKLAGVGFVSSIGAVASSNSLFAVRKFLSPAIIADQQIARSPILKTAVVYACFLGISANLRYQIIAGVVEHRISDQFSSQTFLVNMLSFVARTINSYWGTQQWIDLARSTGLQKKPVLRRLKVNEDKSVIILG 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01511 718 Gene3D - 120 300 - -
Car05g01511 718 SUPERFAMILY EreA/ChaN-like 162 401 - -
Car05g01511 718 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 158 700 - -
Car05g01511 718 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 158 700 - -
Car05g01511 718 Pfam Haem-binding uptake, Tiki superfamily, ChaN 157 365 IPR007314 -
Car05g01511 718 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 48 160 - -
Car05g01511 718 Pfam Protein RETICULATA-related 472 653 IPR021825 -
Car05g01511 718 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 48 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01511 Car-Chr5 59473193 59479346 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01511 - - mtr:MTR_3g071970 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01511 05 59473193 59479346 Car05g01511 05 59473193 59479346 ECH