Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01489 ATGGCGAACGTTGATGAACTCTTATCTTCCTTAATTTCAGATATAAACACCTACACCGGCAAAGACCCTCTTCTTCCTTGGCTCCGAGGGATCCGAAAAATGAAGGACAGTCTTCCCTCAAAACCCCTCAAGGAAAAACTACCCGAGTTCTTGCAGAAATGCGCCCAAACATTCGAGCTCGATCGACGCTACAAAAACGACATGCGTTATCTTCGTGTTTGGCTCCACTTGATGGATTTTGTGGATGATCCGATAACACTATTGAGAACCATGGAGGTTAATCAAATTGGAACAAAACGTTGTCAATTCTATCAAGCATATGCTCTTTACTACGAGAAGAGTAAGAAGTATGAGGAGGCAGAGAAAATGTACCATATGGGAGTGAAGAATCTTGCGGATCCTGTGGATGAATTGCAGAAATCTTATGAACAATTTCTTCAACGCATGAAGCGCAAGAACAAGAAGAAAATTCAGCATCAGGAAATGAGAGCTGCCAGGAGGCCCCTGTCTACAAATAGTATCGCAAGTTCTGTAAATAAAGATTTAGCTGATGATAGACGCGTAAAGGCTAAAACTGATGAGAACAGGAGATTTCGTGGTGATGATACAGTTGTTGTAGTCAAGTTTGTTGACACTGCCATGGATGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGACTGGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCAGTGAGCCATTAGAGACTGTTGCTATGGCCAGGAAATCACATAAAAACAATTCAAAAGAAAATCGCGGTACAAATAACAACTTCGAAGTTTTTGTTGATGAAAACTTGGACAATGGAATCAAACCAAGTGATTCCTTATCACTTCAGCACATAACTGAGGCTAGCAAACCTCACCAAGAATCACTCCAGATATATATTGATGATGAAGGACATTCTGAAGGTTCTACTTCATCAGCTTCAAAAGTAAATGGCTTTGTTTTCCCCCGACCAAAAGATGTTCCTTCTAAAAAATCTAGTGTTACGGATGCATCAAGCTCTCGTAATTCGAAGTTCAGAGAGGATACAGTTGTTTGCAGATTTGTTGGTTCTGCCATTTCGGATGAACCAGAGGTGGAAAATGTTTGTCACCATGGTTTAGTTGATCCCACAATCAACATGAAGGAAGCCATGAATGACATAAATAACATGTTTGGTAAGCCAATGGATTTCATTAGAAAAAACAGATCATTGAAGCAGGAGAAAGCACCATCAAACAATAGTGGAAAGGAATTCGGCGGGTTTACTATCCTTGCTGATGATGCTGATGACCTTGAACAGAAACAAGATCCTCCACTATCAAAATCGCTAGGAAAGTCCAAGGAATCTGATTTATTTGAGCCAACTCTCCACACAAAGGAAGCCATGGATGACATTAACAAGATGTTTAATATGCCTTTGGATTTTTAG 1464 0.4044 MANVDELLSSLISDINTYTGKDPLLPWLRGIRKMKDSLPSKPLKEKLPEFLQKCAQTFELDRRYKNDMRYLRVWLHLMDFVDDPITLLRTMEVNQIGTKRCQFYQAYALYYEKSKKYEEAEKMYHMGVKNLADPVDELQKSYEQFLQRMKRKNKKKIQHQEMRAARRPLSTNSIASSVNKDLADDRRVKAKTDENRRFRGDDTVVVVKFVDTAMDGKSEAEDACHHGLVDPTINMKEAMNAINSMFSEPLETVAMARKSHKNNSKENRGTNNNFEVFVDENLDNGIKPSDSLSLQHITEASKPHQESLQIYIDDEGHSEGSTSSASKVNGFVFPRPKDVPSKKSSVTDASSSRNSKFREDTVVCRFVGSAISDEPEVENVCHHGLVDPTINMKEAMNDINNMFGKPMDFIRKNRSLKQEKAPSNNSGKEFGGFTILADDADDLEQKQDPPLSKSLGKSKESDLFEPTLHTKEAMDDINKMFNMPLDF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01489 487 SMART mad3_bub1_i 4 128 IPR013212 -
Car05g01489 487 MobiDBLite consensus disorder prediction 437 466 - -
Car05g01489 487 Gene3D - 9 165 - -
Car05g01489 487 ProSiteProfiles BUB1 N-terminal domain profile. 11 172 IPR013212 -
Car05g01489 487 Pfam Mad3/BUB1 homology region 1 11 128 IPR013212 -
Car05g01489 487 PANTHER OS11G0128700 PROTEIN 4 179 - -
Car05g01489 487 PANTHER OS11G0128700 PROTEIN 180 487 - -
Car05g01489 487 MobiDBLite consensus disorder prediction 315 354 - -
Car05g01489 487 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 180 487 IPR015661 GO:0007094
Car05g01489 487 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 179 IPR015661 GO:0007094
Car05g01489 487 Coils Coil 135 155 - -
Car05g01489 487 MobiDBLite consensus disorder prediction 439 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01489 Car-Chr5 59193871 59197347 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01489 - - mtr:MTR_3g071460 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01489 05 59193871 59197347 Car05g01489 05 59193871 59197347 ECH