Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01460 ATGAGAATTGGAAGCAAATTATTAATCAAAGGAGCTGAAATGGGTTTTTCATCTAAAGAAGAGAAATCCAAAAGAGTATTAAGGGTGGTGAAGACACTGTTTTTCTTAATCACCATGATTCTTTCACTTCTTCTTTTTTCTGCTCCTGTTCTATTGGTTATTGCTGATGCTCTTCTTCCTTCAGCTCTTCTCTCTACACTTTCACCTGTTTCTATTTCTCCGTCGATTACAACACTCTCTTCTCATTTCAACAACTACGATTTTCGTTACTCTCTCATTGATATACCACTCGTTTCAATAATTAGATCCTTCATCATCTTCTGTGTTTATAGTTTGTGTGATGGACCAAGACTTTCGAGAGGACCTTATTTGGGAGTTACTACGATGTGCTCTGTTTTGTCTCTGTTGTTTGTTTCGTTTAAAGCTGTTTATGTGTTCGGAAATGGAAGTGGGTATGTTGGAGGATCAGAAATTGCTCTGTTCGTTTGTTCTTGTGTGTTGGCTGTGGGACATGTTGTCGTGGCATATAGAACAAGTTGTAGAGAGAGAAGAAAGCTTTTAGTCTACAAGATTGACATTGAAGCTATTTCAGCTTGCACAAACGGGTATCCTAGGTATCCAAAGATTCTTCAAGAAGAGAGAATCAAATGA 651 0.3763 MRIGSKLLIKGAEMGFSSKEEKSKRVLRVVKTLFFLITMILSLLLFSAPVLLVIADALLPSALLSTLSPVSISPSITTLSSHFNNYDFRYSLIDIPLVSIIRSFIIFCVYSLCDGPRLSRGPYLGVTTMCSVLSLLFVSFKAVYVFGNGSGYVGGSEIALFVCSCVLAVGHVVVAYRTSCRERRKLLVYKIDIEAISACTNGYPRYPKILQEERIK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01460 216 Pfam Cholesterol-capturing domain 51 168 IPR019498 -
Car05g01460 216 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 14 214 - -
Car05g01460 216 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 14 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01460 Car-Chr5 58842133 58845596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01460 21 208 Miscellaneous Gene Families AT1G80280 42.718 5.66e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01460 - - gmx:100811069 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01460 05 58842133 58845596 Car05g01460 05 58842133 58845596 ECH