Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01459 ATGAAGATGACAGTGGAACCAACCTACTCTCCAAGTCCAACTCCCAAAGAAGAAGTCGAATGGGTCCCACTCCCAAAACACCCTCTCTTCACCTCCATCTCTCACGGCGGTTCCGTCACATTTTCCCGAAACCTACTTGCTTGGGACGGAGCCTCTCGCCTTTATTTCTGGGACTCCAACAATAACTGCCTTCATCGTCTATCTCTTCGCCTCGGCGATCCTGATCCTACTTCCGTTCTCGCCGCTTCTCCCTCTAAGGTGTTGCGAACGGATATTGTGCTTGACTTTGATGTTCATAGAATCTCCATCAATAGGAATGGAACAGCGATACTTCTTTTCGGTTCTGAAAGACTTTGTGTTATGTATCTTTATGGACGCACATCTAAGAAGGACGTAAATTTGATTTGCAGGACTATTACTGTTGGTTCTCAAACACATTCCCTTGGAAACAATGATATTCGTGTATTGGAAGCATTATGGCACCCTTACAGTGATACCCATTTGGGTATCCTTTCTTCCGACTCAGTTTTTAGGCTTTTCAATCTGGCGGTGGATCCTTTGCAACCAGAGCAAGAATATTATTTACAGCCTACGGGGCCTGGTAGATCCAGAAATGCCTCATCAATGTGCCCAGTTGGTTTCTCTTTTGGCGGAGAGCACTTGTGGGACAGGTTTAGTGTTTTTGTTGCATTCAGCGATGGGGCTATCTATTTAATTTGCCCTGTTGTTCCATTTGGAAGTCTCATCAAATGTGAATCTCTATTAGAATTACACAATGATGCTCATACATTTGGGCTAATATCAGCCAACTCTGTAGCGGCTAGTAATTCAAAGTTGGCAATCTCCTGGCTAGAAGCAACATTTCCTGAGTTACAGCATCAAGAAACTGAAGGAAACAGCTTGTCTATGCTAAGAGCTCATGCTTATGCTGTATTTGATGCATCTCTTGTCTTGCAGGGACCTCTGCGAAGAGTAGGTCAGAGTGGAAATGAAGATTTGGTCGGTCGTAGTGCTGAATGTGAGGGTCGTGCTGTTAGTTTTCTCTACAATTCAGTCAGCAAAGACTCTATCTTGGTGACTGCCTGGAGTGGTGGGCAATTACAGATAGATGCTCTAGCTGATGAAATCCAACCTGTTTGGAGTGTTGGCAGTCCACCTCGTCTTCGTCTTGATTCCCACGACGAAATTCTTGGCCTTGCTATGATTTGTGAATCAATTTCTGGCAGTCGTCAGGAGAAGCTTGATCATAATGCCGGGTTGGTTAATCCACCCCCTTTGCTGAGATTGGCTATTGTTGATTTGGCTCTGCCACGAAGAGCAGAAAACAGTTATAATATTGCATTGGTCATTGATACCCTTATGCCAGAGAGAATATATGCCCTTCATGATGGAGGGATTGACTCGATAGTGTTGCATTTTCTTCCATTTACAAGTCAGACAAATGGAAAGGATGATACAATGAAGACACCTTCTGTACATCCTGTTCTAAACACTTGCCAGAGTGGATGCACTTCAGAGCCTTCACTCTGCGGTTTTGTGTCATTGTCAGATTCATTTGGATATTCCTGGATTGTAGCTGTTACCCATTCTCAAGAATGTGTTGTGCTTGAGATGAAAACTTTGAACCTCTTGCTTCCGTTAAGTATTGATATGGAGAAGAATCCCATTCAATCAGAGGGGCAATCAAAAGAGAGATATATACAACCAATAATTAGCAAAGAACTACTTAGTGGGCCCAAGGAGGTAATTATTCCATGGGCCTCTCAAAGTTTACGTTCAGTTGCAGCTGACTCAATTGAAGGCCGATCAACATTGCACCAGTATTTCAAGTTGTTTCATGAAACTTATGTGGAATATGCACATAAGGTGCATCTGGAACTCAAGCATCATGCGCCTCAGTTGAAGAAAATCATTAATGATCAACATTCTCGATTAGGTGATGCACAGCAGAAACTTTTGAAAGTTGAGGAGAAAGAGTCTATATTACAGAAAACGGTTGATCGTGTAACTCAAATGCACAATTCTTTGGAGGAGCGCTTACAACGATTAAGGAACTTACCTGGTGCTCACAAAAAACCACTGTCCAGAGCAGAGCGACAGTTTAAGTCTGAACTTGACCACTTCAAGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGAGGCGCTAAGTGCGAGGCTGAGAAGGCACACACAAGCTTCAAAAGCTATTCAACAACAAAAGAAAATGCCAGGGAAGAAAATTGGTGCTGGAGATGACCAGATATCCATACTCAAATCGTCGCTTGAAAAACTTTCACTTGTAAATACTGAAAATTCAAAGAAAGTTAAGCTTGTTGAGTCCACATTGAGTAACAAAGAAAGAATCAGTGGAGAATCCAGTCTTCCTATGCTTAAAAACAGTTAG 2406 0.4264 MKMTVEPTYSPSPTPKEEVEWVPLPKHPLFTSISHGGSVTFSRNLLAWDGASRLYFWDSNNNCLHRLSLRLGDPDPTSVLAASPSKVLRTDIVLDFDVHRISINRNGTAILLFGSERLCVMYLYGRTSKKDVNLICRTITVGSQTHSLGNNDIRVLEALWHPYSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPTGPGRSRNASSMCPVGFSFGGEHLWDRFSVFVAFSDGAIYLICPVVPFGSLIKCESLLELHNDAHTFGLISANSVAASNSKLAISWLEATFPELQHQETEGNSLSMLRAHAYAVFDASLVLQGPLRRVGQSGNEDLVGRSAECEGRAVSFLYNSVSKDSILVTAWSGGQLQIDALADEIQPVWSVGSPPRLRLDSHDEILGLAMICESISGSRQEKLDHNAGLVNPPPLLRLAIVDLALPRRAENSYNIALVIDTLMPERIYALHDGGIDSIVLHFLPFTSQTNGKDDTMKTPSVHPVLNTCQSGCTSEPSLCGFVSLSDSFGYSWIVAVTHSQECVVLEMKTLNLLLPLSIDMEKNPIQSEGQSKERYIQPIISKELLSGPKEVIIPWASQSLRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVHLELKHHAPQLKKIINDQHSRLGDAQQKLLKVEEKESILQKTVDRVTQMHNSLEERLQRLRNLPGAHKKPLSRAERQFKSELDHFKEVELDALHSSVEALSARLRRHTQASKAIQQQKKMPGKKIGAGDDQISILKSSLEKLSLVNTENSKKVKLVESTLSNKERISGESSLPMLKNS 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01459 801 PANTHER NUCLEOPORIN NUP84-RELATED 11 787 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Car05g01459 801 Coils Coil 720 740 - -
Car05g01459 801 Coils Coil 666 686 - -
Car05g01459 801 Pfam Nuclear pore component 441 780 IPR019321 -
Car05g01459 801 Pfam Nuclear pore component 24 206 IPR019321 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01459 K14318 - gmx:100801853 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01459 05 58832505 58838429 Car05g01459 05 58832505 58838429 ECH