Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01199 ATGGATGGGAAAAACTCTCTTCAAATAACAAGAACTGCTTCTGGTGCTTATGATGATGATGGACGTGCCAAAAGAACTGGAAATTTAAAGACTGCTGTGGCACATATCATAACAGCTGTTATTGGTTCTGGTGTATTGTCATTGGCATGGAGTATTTCTCAATTAGGATGGATTGGAGGGCCAATTGCCTTGGTTTCTTGTGCAATAGTTACCTGTATTTCTTCATTCCTTTTGTCTGATTGTTACAGACATCCTGACTCTGTAACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAGTCAATCTTGGTCAGAAAAGGACTTTTATGGCTGGTTGCCTTCAATTTTTGACCTTGTATGGGACTAGTACTGCCTATGTAATTACCACAGCAACCAGTTTGAGGGCTATTTTGAGATCAAATTGTTATCACAAAGAAGGACATGGTGCTCCTTGTACTTATGGGGGCAATACGTATATGATGCTGTTTGGACTTGTTCAGATTGTAATGTCATTCATACCAGATCTCCACAACATGACTTGGGTTTCAGTTGTTGCTGCTGTTATGTCCTTTACATATTCATTCATTGGATTAGGACTTGGCATGGCAACTTTCATAAAAAATGGAGCAATTATGGGAAGCGTGACAGGAGTACCAACTGCTAAAATTACTGATAAAATATGGTTAATCTTCCAGGCACTTGGTGATATTGCCTATTCATATCCATACTCAATGCTTTTTCTTGAAATACAGGACACACTAGAGTCTCCTCCAGCAGAGAATCAAACCATGAAAAAGGCCTCAATGACTGCAATCTTCATTACAACATTCTTCTACCTATGTTGTGGATGTTTTGGATATGCAGCTTTTGGAAATGCTACACCAGGAAATCTCCTCACAGGGTTTGGTTTTTATGAGCCATTTTGGCTTATTGACATTGCCAATGTTTGCATTGTCATTCATTTGGTTGGAGGATATCAGTTATACAGTCAACCAATATATACCACAGCTGATAGATGGTTTACAAAAAATTTCCCTGACAGTGGCTTTGTAAATGACTTCCACAAAGTGAAACTTCCTCTATTACCTACTTTACACATCAACCTTTTCAGATTCTGTTTCAGAACAACCTATGTGATTTCAACCACAGGAGTAGCAATTCTATTTCCTTACTTCAACCAAGTTCTTGGAGTGTTAGGAGCTGTAAACTTCTGGCCACTAGCAATATATTTCCCAGTTGAGATGTACTTTGTACAGAAGAAAATTGGAGCATGGACTAGACAATGGATTGTTCTTAGAATATTTAGTTTTGCTTGCTTTCTTGTGACATTAGTAGGATTTGTTGGGTCATTAGAAGGAATCATACGTGAGAAACTTGGTTGA 1386 0.3831 MDGKNSLQITRTASGAYDDDGRAKRTGNLKTAVAHIITAVIGSGVLSLAWSISQLGWIGGPIALVSCAIVTCISSFLLSDCYRHPDSVTGKRNYSYMDAVRVNLGQKRTFMAGCLQFLTLYGTSTAYVITTATSLRAILRSNCYHKEGHGAPCTYGGNTYMMLFGLVQIVMSFIPDLHNMTWVSVVAAVMSFTYSFIGLGLGMATFIKNGAIMGSVTGVPTAKITDKIWLIFQALGDIAYSYPYSMLFLEIQDTLESPPAENQTMKKASMTAIFITTFFYLCCGCFGYAAFGNATPGNLLTGFGFYEPFWLIDIANVCIVIHLVGGYQLYSQPIYTTADRWFTKNFPDSGFVNDFHKVKLPLLPTLHINLFRFCFRTTYVISTTGVAILFPYFNQVLGVLGAVNFWPLAIYFPVEMYFVQKKIGAWTRQWIVLRIFSFACFLVTLVGFVGSLEGIIREKLG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01199 461 PANTHER OS05G0424000 PROTEIN-RELATED 4 460 - -
Car05g01199 461 Pfam Transmembrane amino acid transporter protein 26 456 IPR013057 -
Car05g01199 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 4 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01199 Car-Chr5 54981467 54984514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01199 17 458 Organic Solute Cotransporters AT5G09220 51.910 4.09e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01199 K24917 - gmx:100818535 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01199 05 54981467 54984514 Car05g01199 05 54981467 54984514 ECH