Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01195 ATGGCTTCTCCCAATCAACCACCACCTTTCGATATGCACTCGTTCTTCAATCCTCCTAACCCCAATCTCaaccctaaccctaaccctaaccctaacAACATTTCTTCTCAATTCCCTCCATCTGCTCCTTCACCACCACCACCTTCTTCTTCCTCCTCTTACCCTCCACCCACCGGTCCTTTCACCCCAACACCTTTCCCTCACCACAACAACAATAACAATTATCCCTTCGATCACCACCATTTCCCAATTCAACACCTTGCCCCCTCAGCGGCTGCTATTACGGCCGCGAATGCAGCCGCCGCGGCGTTGATTCGGTTGCCGAGTAGTAAGGTTCCTAAAGGAAGACACTTGGTTGGTGATCATGTTATGTATGACGTGGATGCTAGGTTGCCTGGTGAAATGCAGCCTCAACTTGAGGTTGCACCTATTACCAAATATGGGTCGGATCCTAATCCGGTTTTGGGTCGACAGATTGCCGTGAATAAGTCTTATATATGTTATGGGTTGAAACAGGGGAATATTAGAGTGCTTAATATTCACACTGCAGTTAGATCTTTGCTTAGAGGCCACACTCAGAGAGTCACAGACTTGGCGTTCTTTGCTGAAGATGTTCATCTTCTGGCTAGTGTTGGCACAGATGGCCGTGTCTATGTGTGGAAAATTTCTGAAGGTCCAGATGATGAAGATAAGCCTCAAATCACTGCCAATATTGTTATTGCTATTCAAATAATAGGAGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGCCACAAACAAGAGATTTTAATAGTTGGTATGGGAAAACATGTTCTGAGAATTGACACAACAAAAGTTGGAAATGGTGAAGCCTTCATGGCAGAAGATCCTCCAAAATGTCCTCTAGACAAGCTCATTGATGGGGTTCAGCTTGTAGGATCACATGATGGGGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAATCGATTGGTATCTGCATCACAGGATGGCACGATAAAGATATGGGAAGACCGGAAGACACAACCGCTTGCTATTTTGAGACCACATGATGGGCATCCTGTTTTTTCAGCTACATTTTTTACTGCTCCCCACCAGCCTGATCATATTGTCCTTATCACAGCTGGGCCACAAAATCGGGAAGTGAAGCTGTGGGTCTCAGCAAGTGAAGAAGGTTGGCTGCTCCCAAGCGATACTGAATCTTGGAAATGCACTCAGACATTGGAGTTGAAGAGTTCCGCGAAGCCATCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGCCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTTCACTTAGGATATGGTCCTAATCCTGAATCAACTCGCATGGATTATATAGCCGAGTTTACTGTGACCATGCCCATTCTAAGTTTTACTGGAACAAGTGATATTTTGCCTCATCGTGAACATATTGTTCAGGTTTATTGTGTTCAGACACAGGCTATTCAGCAGTATGCTCTGGATTTAGCACAATGCTTGCCTCCGCCATTGGAAAATGTGGGACTAGATAAGTCTGATTCCAGTGTTTCCCGAGATGCAATTACTGCTGAAGGATTCACCTCTTTAGACTCAGCTGCAGGTAGAACATCTGAGATGTCTTTACCCACTTCTGCTCCCAGAACAATAATGCAAGCTAGTAGCATCGAGAGTGGTCTTGTGGCAAGATACCCTTTAAGCTCTGGTCATATTGAGGCACCTATTTCTAAAGAAATCAGCAGTTCAAATATTGAAGCTAAACCTGTTACATTGGCTCCTTCTAGTAGTGATGCTGATATTGCTTGTATTCCTTCTCCACCTCTTCCTTTGAGCCCAAGGTTGTCCAGGAAGCTTTCTGATTTTAGGAGTCCACAATCTAACTACAGCGATCATGTTGGGGACCAAGCTGTTAATGATTATTCAGTTGACAGACAAATGGATTCCATTCAGAGGAACTTGTCCGACCAATTCAATAATGATTCAAAGAAGGATGAAAAGAAAATCAAACAGGATGACATTTCTAGTGTACTTAACCCTTCTGTCATGTTTAAGCAACCAACTCATCTGGTTACTCCATCTGAGATCACAAAAGCCAGTTCCTCCTCTGAGACTAATATGATTGATAGAATGAGTGAGGTAGAAACCAAGATCCAGGATGTGGTTGATGTGGGTAATACTGAAGTAGAAGTGAAAGTGGTAGGTGAGACAAGGCCTAATGAAAGCGATGAATTTGGCAGGCAGGGGCCACAACAAAACCCAGTTTCTGATGGCAAAGAAAAATTCTTTTGCTCTCAGGCTTCTGATCTTGGTATTGAGATGGCCCGAGAATGTGGTGCGATAGGTGGGGAGTCTTACATTACAGAGGAATCTGGACAAGTTGATTCAACTGGTGCGGACTCACTGGCCCAGCCTTCTAATGCTGGCGAGGATGGATTCCAAGACTTGGCAAAAGATGTCCATGACAAGGTTTCCGACTCATCTACATCAATGATAGTACCACCGTCATCTGCACCTAACTCAAAAGGGAAGAGACAAAAGGGGAAAAATTCTCAACCATCAGGTCCATCTTCTCCATCTCCAAGTGCATGCAACTCAACCGATTTGTCCATTGAACCAAATGGAATTTCAAACCTCCCATCTACTGAAAATGGTTTTCCTCAAATTATTGCAATGCAAGATTCACTCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGACGATGATGGTTGCAGTTCCAGTGACAAAAGAGGGTAGAAGGCTTGAGGCCGCCTTAGGGAGAAGCATGGAAAAAGCTGTGAAGTCCAATGCTGATGCTTTATGGGCTAGAATTCAAGAAGAGAATGCAAAAAATGAAAAGTTGTTGCGAGACCGTATCCAGCATGTTACAGGTTTAATTACGAACTTCATGAACAAGGATCTTCCAGCAATATTGGAGAAAACTGTAAAGAAGGAAATGGCTTCAGTTGGGCAAGCTGTAGGTCGTTCAATATCTCCTGCTATTGAGAAAATAATATCCTCTACTATAGTTGAATCCTTCCAGAGAGGAGTGGGCGACAAGGCAGTGAATCAACTTGATAAATCAGTTAATTTAAAACTTGAAGCTACCGTAGCTAGGCAAATCCAAGCACAGTTTCAGACAACTGCCAAACAGGCTCTTCAGGAAGCGCTCAAATCCAGTTTTGAAACAACAGTGATTCCTGCATTTGAGATGTCCTGCAAAGCCATGTTTGAGCAAGTGGATTCTACATTCCAAAAAGGCATGGCTGAACATTCAACTGCAGTGCAGCAACGCCTAGAATCTGGGCCTACTTCATTGGCAATGACTCTAAGGGATTCCATTAATTCGGCATCATCAGTTACTCAAACCTTGAGTAGAGAAGTTCTCGAAGGTCAGAGAAAGCTAATGGCACTTGCAACCTCAAGATCAAACTCAGGCACATTGAGTACTCTTCCCATCCAACTGAACAATGGTCCTTTACTTCATGAAAAGGTTGAGGCACCAGTAGATCCCACAAAGGAGTTAGCAAGGTTGATTTCTGAACGGAAATATGAGGAGGCGTTTATTGCAGCACTACATAGAAGTGATGCATCTATTGTATCTTGGTTGTGTTCTCAGGTTGATTTACACGGACTTCTTTCAATGGTTCCTCTTCCTTTAAGCCAAGGTGTAGTGCTTTCACTTCTGCAACAGTTGGCGTGTGATATCAACAACGACATGTCCCGAAAGATCGCATGGATGACTGACGTGGCTACTGCCATAATTCCCTCGGATCCCATGATAACAATGCACGTGCGACCCATCTTCGAACAAGTGTATCAGATACTGAGTCATCAACGTAGCTTACCTACAATGACTGGAGCTGATCTCTCAAGTATCCGTCTTTTATTGCATGTCATCAACTCTATGCTTACGACATGTAAATGA 3975 0.4325 MASPNQPPPFDMHSFFNPPNPNLNPNPNPNPNNISSQFPPSAPSPPPPSSSSSYPPPTGPFTPTPFPHHNNNNNYPFDHHHFPIQHLAPSAAAITAANAAAAALIRLPSSKVPKGRHLVGDHVMYDVDARLPGEMQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVYVWKISEGPDDEDKPQITANIVIAIQIIGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKVGNGEAFMAEDPPKCPLDKLIDGVQLVGSHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTQPLAILRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSDTESWKCTQTLELKSSAKPSLKDAFFNQVAALPHAGLLLLANAQRNAIYAVHLGYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHREHIVQVYCVQTQAIQQYALDLAQCLPPPLENVGLDKSDSSVSRDAITAEGFTSLDSAAGRTSEMSLPTSAPRTIMQASSIESGLVARYPLSSGHIEAPISKEISSSNIEAKPVTLAPSSSDADIACIPSPPLPLSPRLSRKLSDFRSPQSNYSDHVGDQAVNDYSVDRQMDSIQRNLSDQFNNDSKKDEKKIKQDDISSVLNPSVMFKQPTHLVTPSEITKASSSSETNMIDRMSEVETKIQDVVDVGNTEVEVKVVGETRPNESDEFGRQGPQQNPVSDGKEKFFCSQASDLGIEMARECGAIGGESYITEESGQVDSTGADSLAQPSNAGEDGFQDLAKDVHDKVSDSSTSMIVPPSSAPNSKGKRQKGKNSQPSGPSSPSPSACNSTDLSIEPNGISNLPSTENGFPQIIAMQDSLNQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRSMEKAVKSNADALWARIQEENAKNEKLLRDRIQHVTGLITNFMNKDLPAILEKTVKKEMASVGQAVGRSISPAIEKIISSTIVESFQRGVGDKAVNQLDKSVNLKLEATVARQIQAQFQTTAKQALQEALKSSFETTVIPAFEMSCKAMFEQVDSTFQKGMAEHSTAVQQRLESGPTSLAMTLRDSINSASSVTQTLSREVLEGQRKLMALATSRSNSGTLSTLPIQLNNGPLLHEKVEAPVDPTKELARLISERKYEEAFIAALHRSDASIVSWLCSQVDLHGLLSMVPLPLSQGVVLSLLQQLACDINNDMSRKIAWMTDVATAIIPSDPMITMHVRPIFEQVYQILSHQRSLPTMTGADLSSIRLLLHVINSMLTTCK 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01195 1324 MobiDBLite consensus disorder prediction 804 820 - -
Car05g01195 1324 MobiDBLite consensus disorder prediction 631 647 - -
Car05g01195 1324 Gene3D - 247 454 IPR015943 GO:0005515
Car05g01195 1324 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 91 1324 - -
Car05g01195 1324 SUPERFAMILY WD40 repeat-like 154 443 IPR036322 GO:0005515
Car05g01195 1324 MobiDBLite consensus disorder prediction 804 894 - -
Car05g01195 1324 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 307 340 - -
Car05g01195 1324 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 91 1324 IPR045152 GO:0031087
Car05g01195 1324 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 141 453 IPR032401 -
Car05g01195 1324 MobiDBLite consensus disorder prediction 608 649 - -
Car05g01195 1324 Gene3D - 125 238 IPR015943 GO:0005515
Car05g01195 1324 SMART WD40_4 181 221 IPR001680 GO:0005515
Car05g01195 1324 SMART WD40_4 303 340 IPR001680 GO:0005515
Car05g01195 1324 MobiDBLite consensus disorder prediction 1 77 - -
Car05g01195 1324 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 188 225 - -
Car05g01195 1324 MobiDBLite consensus disorder prediction 756 771 - -
Car05g01195 1324 Gene3D - 1236 1324 IPR044938 -
Car05g01195 1324 MobiDBLite consensus disorder prediction 1 64 - -
Car05g01195 1324 MobiDBLite consensus disorder prediction 748 771 - -
Car05g01195 1324 ProSiteProfiles Trp-Asp (WD) repeats profile. 188 230 IPR001680 GO:0005515
Car05g01195 1324 ProSiteProfiles Trp-Asp (WD) repeats profile. 307 349 IPR001680 GO:0005515
Car05g01195 1324 MobiDBLite consensus disorder prediction 838 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01195 Car-Chr5 54846549 54855547 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01195 K12616 - gmx:100802374 2017.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01195 05 54846549 54855547 Car05g01195 05 54846549 54855547 ECH