Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01155 ATGGAAATTGGGATAGAGGATGAGATGGTGGACATGTCAACGTCACCACCATCAAATGGTTCCATGAAGATAGCAAGGAGCAATGACTTTGGTCACAACAACAAGGAGTTTATGTCTAAGGAAACATACCTTAGGAATAGGTACTCAGAAATTGACATAGAAGTTGATGATTCAATTTTCAACCAAAATCACCCTCTCCCCATATTTCTAAAGTTTGAAGATGTAGAGTATAAGGTGAGAAATAGCCAATCAATTTCAAATAACCCTGTGAAGGCAATGGTATCAAAGGTAGCCACACAACACACAGTGGAAGAAGATAGATACAAGAGGATTTTGAAGGGCATTACTGGAAGCATTGGCCCTGGTGAAATTCTTGCTCTAATGGGTCCCTCTGGCAGTGGAAAAACAACCTTGTTAAGAGTTATAGGTGGAAGATTGCTTGACAATGTAAAAGGAAAAATAACTTACAATGATGTTAAATATACTCCATCTGTTAAAAGAAGGATTGGTTTTGTGACACAAGAGGATGTGCTTTTCCCACAATTAACTGTGGAAGAAACATTAGTCTTCTCAGCATTTTTAAGGTTGCCAACCAATATGAACAAGCAGCAAAAATATGCAAAAGTGGAGACAACTGTCAAGGAGCTAGGCCTTGAAAGATGTCGACACACAAAAATAGGTGGAGGATTTCTCAAAGGCATATCAGGAGGAGAAAGGAAAAGAACAAGCATAGGCTATGAAATTCTTGTTGATCCTTCATTGCTTCTACTTGATGAACCAACTTCAGGCCTTGATTCTACCTCAGCAAACAAACTCCTTGTCACACTTCAAGGACTTGCTAAGGCTGGAAGGACTATAATCACAACAATACACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCTATTTACTATGGAGCTGCTAGAGAAACAATGGAGTACTTTTCATCCTTGAGGTTCAGCCCTGAAATAGCAATGAACCCTGCAGAGTTCTTGCTTGACATGGCAACTGGTGAAGTGAACGACATAAGTGTTCCAACAGATATTTTTGAAGATCAAGAATCTACTCATGACCCTTCAGAAGCTGTTATTAAATATCTACAACTCAAGTACAAAACTCTACTGGAGCCAAAAGAAAAAGAGAATCACAGAGGAGTAAACACACCAGAACATCTTCAAGTAGCCATTCAGGTTAAGAAAGAGTGGACATTGAGTTGGTTGGACCAATTTGTGATTCTTTCAAAGAGAACATATAGAGCAAGATGCAAAGACTATTTTGACAAGTTAAGACTAGTTCAAGCACTTGGAGTAGCCCTTTTGTTAGGGCTACTTTGGTGGAAATCTTCAACCAACACAGAAGCTCAACTCAGAGATCAGGTTGGTTTAGCATTCTACATATGTATATTCTGGACATCTTCATGCATTTTTGGAGCAGTCTATGTGTTTCCATTTGAAAAGTACTACTTGATAAAAGAAAGAAAAGCTGACATGTATAGATTAAGTGTATACTATGTATGCAGCACTTTATGTGACATGGTAGCACATGTTTTCTATCCAACATTTTTCATGATTATTGTCTACTTCATGGCTGGATTTAAGAGGACTGTGGCTTGCTTCTTTCTCACATTATTTGTTGTTCTACTAATAGCTATAACAAGTCAAGGTGCAGGAGAATTGTTTGGAGCTGCAGTTATGAGTATTAAAAGAGCAGGGATGGCAGCTTCTTTGGTACTAATGTTATTCCTCCTAACTGGTGGCTACTATGTTCAGCACATACCAAAATTCATGCAATGGTTAAAGTATCTTTCATTTATGTACTATGGTTTTAGGCTTCTACTAAAAGTGCAATATTCAGGAGATGAATTATATGATTGTGAAAGCAAAGGAGGGTGTAGGCCTCTACAGAGTTCACCAACATTTGACACTGTAAACTTGAAAGGTGGATTAAAAGAAGTTTGGGTTATGGTAGCTATGGCTATATGCTTTCGTTTGTTAGCTTACTTTTGCCTCCGTAGAAGAATTGATGTCTGA 2061 0.3823 MEIGIEDEMVDMSTSPPSNGSMKIARSNDFGHNNKEFMSKETYLRNRYSEIDIEVDDSIFNQNHPLPIFLKFEDVEYKVRNSQSISNNPVKAMVSKVATQHTVEEDRYKRILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLLDNVKGKITYNDVKYTPSVKRRIGFVTQEDVLFPQLTVEETLVFSAFLRLPTNMNKQQKYAKVETTVKELGLERCRHTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLVTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGAARETMEYFSSLRFSPEIAMNPAEFLLDMATGEVNDISVPTDIFEDQESTHDPSEAVIKYLQLKYKTLLEPKEKENHRGVNTPEHLQVAIQVKKEWTLSWLDQFVILSKRTYRARCKDYFDKLRLVQALGVALLLGLLWWKSSTNTEAQLRDQVGLAFYICIFWTSSCIFGAVYVFPFEKYYLIKERKADMYRLSVYYVCSTLCDMVAHVFYPTFFMIIVYFMAGFKRTVACFFLTLFVVLLIAITSQGAGELFGAAVMSIKRAGMAASLVLMLFLLTGGYYVQHIPKFMQWLKYLSFMYYGFRLLLKVQYSGDELYDCESKGGCRPLQSSPTFDTVNLKGGLKEVWVMVAMAICFRLLAYFCLRRRIDV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01155 686 MobiDBLite consensus disorder prediction 12 27 - -
Car05g01155 686 SMART AAA_5 121 312 IPR003593 -
Car05g01155 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 683 - -
Car05g01155 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 97 334 IPR003439 GO:0005524
Car05g01155 686 Pfam ABC-2 type transporter 291 352 IPR043926 GO:0140359
Car05g01155 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 326 IPR027417 -
Car05g01155 686 CDD ABCG_EPDR 108 316 - -
Car05g01155 686 MobiDBLite consensus disorder prediction 1 27 - -
Car05g01155 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 3 683 - -
Car05g01155 686 Gene3D - 96 329 IPR027417 -
Car05g01155 686 Pfam ABC transporter 112 262 IPR003439 GO:0005524
Car05g01155 686 Pfam ABC-2 type transporter 419 627 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01155 Car-Chr5 54197802 54203033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01155 110 295 Calmodulin-binding Proteins AT2G36910 30.000 2.69e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01155 K05681 - gmx:100806094 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01155 05 54197802 54203033 Car05g01155 05 54197802 54203033 ECH