Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01151 ATGGGTGTTGGAAATCAAGAAGCAATTAAGCAGTTGCAGTCTCTGATGGAAAATGTGGATGAAAAACTGAAGATCACATTCAAGAATATGCACCAGGGCTATCCTACCGAAACATTAGCACGGTTTCTCAAAGCTAGGGACGGGTGTGTTGCCAAAGCTCATAAAATGTTAATTGATTGTTTACATTGGAGAGTGGAAAATGAGATTGACAAAGTTTTAGCAAAGCCGATCTCTGCGGATTTATACAGAGCTGTGCGAGATTCTCAACTCATAGGAATGTCTGGTTACACAAAAGAGGGCGTACCAGTCATCGCTGTTGGTGTTGGGCTCAGTACATATGACAAAGCATCTGACAAATACTATATACAGTCACACATCCAAGTGAATGAATATAGGGATAGGGTAATCTTGCCAACAGCTACAAAGAAGCATGGACAATATATTGGCACCTGTGTGAAAGTCTTGGATATGACTGGTTTGAAATTTTCAGCACTAAACCAATTAAGGCTTTTGACGGCGATATCTACAATAGATGACTTGAACTACCCGGAAAAGACAGACACATACTATATTGTTAATGCACCATATGTATTCTCTGCATGTTGGAAGGTTGTAAGGCCTCTTTTGCAAGAAAGAACAAGGAGGAAAATTCAGGTGCTGCAAGGCTGCGGGAAGGATGAATTACTCAAGGTAATGGACTATGCATCTCTCCCACACTTTTGCAAAAAACAAGATTCGAAGTCATCAAGACATAATACATCAGCAGGAGTAAATACTACTGAAAACTGTTTCTCCTTCAATCATGTCTTCCATCAACAACTCTACAACTACATAAAGCAACAAGCTAACTTTGTTGAGTCGATATCGCCAATGAGACAAGGATCCTTCTATGTAGACATACCAGAGCCAGACCCTGATGATGCCAAAATAGCAAAGACCATTGAAGTTGAGTTTCACAAATTGGAAAATCAGAATAATGGAACCATTGAAGTTGAGTTTCACAAATTGGAAATTCAGAATAATGGTTTTACTAACTCACTAAATGGTCTTGCAGTTAATGGTCATTGA 1068 0.3923 MGVGNQEAIKQLQSLMENVDEKLKITFKNMHQGYPTETLARFLKARDGCVAKAHKMLIDCLHWRVENEIDKVLAKPISADLYRAVRDSQLIGMSGYTKEGVPVIAVGVGLSTYDKASDKYYIQSHIQVNEYRDRVILPTATKKHGQYIGTCVKVLDMTGLKFSALNQLRLLTAISTIDDLNYPEKTDTYYIVNAPYVFSACWKVVRPLLQERTRRKIQVLQGCGKDELLKVMDYASLPHFCKKQDSKSSRHNTSAGVNTTENCFSFNHVFHQQLYNYIKQQANFVESISPMRQGSFYVDIPEPDPDDAKIAKTIEVEFHKLENQNNGTIEVEFHKLEIQNNGFTNSLNGLAVNGH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01151 355 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 249 IPR001251 -
Car05g01151 355 SMART sec14_4 85 246 IPR001251 -
Car05g01151 355 PANTHER OS09G0258000 PROTEIN 1 340 - -
Car05g01151 355 CDD SEC14 82 240 IPR001251 -
Car05g01151 355 Coils Coil 5 25 - -
Car05g01151 355 SUPERFAMILY CRAL/TRIO N-terminal domain 6 73 IPR036273 -
Car05g01151 355 PANTHER - 1 340 - -
Car05g01151 355 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Car05g01151 355 SUPERFAMILY CRAL/TRIO domain 80 240 IPR036865 -
Car05g01151 355 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Car05g01151 355 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Car05g01151 355 Gene3D - 4 281 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01151 Car-Chr5 54134852 54138996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01151 1 335 Acyl Lipid Metabolism Gene Families AT5G47730 63.690 2.75e-159 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01151 - - cam:101507505 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01151 05 54134852 54138996 Car05g01151 05 54134852 54138996 ECH