Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01149 ATGAGGAACAGAGGCGAGTACACTCCATTATTTGAAACAAAAAATGGCAGAGGAAACTTTATCTATAGACTATTTGCAATATCATTATTTGTATCCATATGCTTCATCTGGTTTTACAGATTCAACCACATCATCATCATAACCACAAACTATACACAAGAAAAAAATGGAGGAAATTGGGTGTGGCTTGGTTTATTTGCTGCAGAACTTTGGTTTGGATTTTATTGGATCCTCACTCAGGCTCTCAGATGGAACAGGGTTTTCAGACAAACATTCAAGAACAGACTCTCCCAAAGATATGAGCACATGTTACCGAAAGTGGACATCTTTGTATGCACAGCAAATCCAGTAATTGAACCACCAATTATGGTAATCAACACAGTGCTATCTGTTATGTCTTATGATTATCCATCTGAAAAGATGAGTGTGTATTTATCTGATGATGGTGGTTCAGAATTAACCTTCTATGCTCTGTTAGAGGCTTCTACTTTTGCAAAACATTGGGTTCCTTTTTGCAAGAGATTCAAAGTGGAACCTAGGTCACCTGCTGCATATTTTAATACCACCCTTCACTCATCATCAGATTCTTTATCAGACATTAACTTTGCTAATGAGTTGGCAATTGTCAAGAAATTGTATAACGAAATGGAAAGACGAATAAAAGATGCAACAGAGTTGAAGAGAGTACCAAATGAAGCACGTTTAAAGCATGAGGGATTTTCTCAATGGGATTCATATTCATCTCCACGTGACCATGGCACAATTCTTCAAatactattTCATAAAAAGGACCCAAATAACTCTAAAGATGTAGACGGTTTCATTTTGCCAACTTTGGTGTATTTAGCTCGTGAGAAGAGGCCTCAATATCACCACAACTTCAAAGCTGGGGCTATTAATTCATTGTTAAGGGTGTCTTCGATTATCAGCAACGGGAAAATAATTCTAACTGTAGATTGTGACATGTACTCAAACAATTCAGAATCTATAAGGGATGCTCTCTGTTTTTTCATGGATGAAGAGAAAGGCCATGAAATTGCTTATGTGCAATTTCCACAAAACTTTGAGAATGTCACTAAGAATGATTTATATTCGAGTGCTCTACTATTGGTTAGCGAGGTAGAGTTTCATGGTGCGGATGGCTGTGGTGGCCCTTTGTACATAGGAACTGGCTGCTTTCACAAGAGAGAATCTCTTTGTGGAATGAAGTTTAGTGATGAATATAGGCATAATTGGATGAATGAAGATGACTTGTTCATAGAAGCAAACTTGCATGAACTAGAAGAAAAATCAAAGGATCTAGCAAGCTGCTCATATGAAGAAAACACACTATGGGGAAAAGAGATGGGTTTGAAATACGGGTGTCCGGTGGAGGATGTGATATCAGGTTTGTCTATACAAAGTCAAGGATGGAAATCAGTGTACTACAATCCACCAAGGAAGGCTTTTTTAGGTGTAGCTCCAACTTCTTTGCTTCAAGTACTTGTTCAACATAAGAGATGGTCTGAAGGAGACTTTCAAATTTTGCTATCTAAGTATAGTCCTGCATGGTATGGTTTTGGAAGGATTAGTTTTGGCCTCCAAATGGGATATTGTGCTTATTGCTTATGGGCACCTAATTGTTTAGCAACATTATATTACTCCATCATCCCTTCACTTTATCTCATCAAAGGCATCAACTTGTTTCCAAAGATGTCAAATCCTTGGTTCATACCTTATGCATATATAATAATTGGAGAAACTATTTATAGTTTGTTGGAGTTTCTTTCATCTGGAGGTACATTTAAAGGTTGGTGGAATGACCTAAGGATATGGTTATACAAGAGAACAAGTTCTTACCTATATGCCTTTAGTGACACAATCTTGAAGCTTTTTGGATTTTCAGATCCAGTCTTTACAATCACATCTAAGGTTTCTGAAGAAGAAGTTTCCAAACGCCATGAGAAAGAAATTATGGAGTTTGGAACATCTTCACCAATGTTCACTATATTAGCAACACTAGCAATGCTAAATTTATTTTGTTTAGTTAGTGTATTGAAGGATGCAATTTTGAGAGATGGTGGGTTTGGAGCTTATGAGAAAATGGGATTACAAGTTATGTTGTGTGGTTTTTTGGTTCTCATTAATTTGCCTATATACCAAGGCCTTTTCTTAAGGAAGGATAGTGGAAAATTGCCAAGTTCTCTTGCCATGAAATCAACAACATTGGCTCTAGCTTTATTTATCTCTTTTAGATTTGTATGA 2244 0.3672 MRNRGEYTPLFETKNGRGNFIYRLFAISLFVSICFIWFYRFNHIIIITTNYTQEKNGGNWVWLGLFAAELWFGFYWILTQALRWNRVFRQTFKNRLSQRYEHMLPKVDIFVCTANPVIEPPIMVINTVLSVMSYDYPSEKMSVYLSDDGGSELTFYALLEASTFAKHWVPFCKRFKVEPRSPAAYFNTTLHSSSDSLSDINFANELAIVKKLYNEMERRIKDATELKRVPNEARLKHEGFSQWDSYSSPRDHGTILQILFHKKDPNNSKDVDGFILPTLVYLAREKRPQYHHNFKAGAINSLLRVSSIISNGKIILTVDCDMYSNNSESIRDALCFFMDEEKGHEIAYVQFPQNFENVTKNDLYSSALLLVSEVEFHGADGCGGPLYIGTGCFHKRESLCGMKFSDEYRHNWMNEDDLFIEANLHELEEKSKDLASCSYEENTLWGKEMGLKYGCPVEDVISGLSIQSQGWKSVYYNPPRKAFLGVAPTSLLQVLVQHKRWSEGDFQILLSKYSPAWYGFGRISFGLQMGYCAYCLWAPNCLATLYYSIIPSLYLIKGINLFPKMSNPWFIPYAYIIIGETIYSLLEFLSSGGTFKGWWNDLRIWLYKRTSSYLYAFSDTILKLFGFSDPVFTITSKVSEEEVSKRHEKEIMEFGTSSPMFTILATLAMLNLFCLVSVLKDAILRDGGFGAYEKMGLQVMLCGFLVLINLPIYQGLFLRKDSGKLPSSLAMKSTTLALALFISFRFV 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01149 747 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 741 - -
Car05g01149 747 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN E1 7 741 - -
Car05g01149 747 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 598 IPR029044 -
Car05g01149 747 Coils Coil 206 226 - -
Car05g01149 747 Pfam Cellulose synthase 430 740 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car05g01149 747 Pfam Cellulose synthase 107 411 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car05g01149 747 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 262 426 IPR029044 -
Car05g01149 747 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 97 188 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01149 Car-Chr5 54098953 54107260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01149 9 747 Glycosyltransferase AT1G55850 57.220 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01149 - - gmx:100815825 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01149 05 54098953 54107260 Car05g01149 05 54098953 54107260 ECH