Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01133 ATGTCTCTTGGGTATGCTGAAAAACTTTCCTTCATTGAAGATGTTGGAAACGTTGGAATGACCGAACATTTCGATTCATCTCACGTTTTGCGTGAAAAAATAGAGCGACTTGCTATCATGATTAAAAAGAGTAAGCATCTAGTAGTGTTTACAGGTGCAGGCATATCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACGCTTCAGCGTGAAGGTAAAGCCTTGCCTGAAGCATCATTACCATTTCACCGTGCGATGCCAAGCTTGACTCACATGGCTTTAGTTGAATTAGAAAAGAATGGTATTTTGAAGTTTGTTATCAGCCAGAATGTTGATGGACTCCATCTTCGATCTGGTATACCAAGGGAAAAACTGGCTGAACTGCACGGGAATTCGTTTATGGAAACTTGCCCTTCTTGTGGAGCCGAGTACTTTCGCGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACGTCACGGCGCTGTTCAGATGAAAAATGTGGGACAAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCCTTACCTCCAAAGGAGATGGATCCTGCTGAGAAGCACTGCAAACAGGCAGATATAGTGTTATGCTTAGGGACAAGTCTGCAAATAACTCCAGCATGCAACTTGCCTCTTAAAGCACTTCGCGGTGGAGGTAAAGTTGTCATTGTAAATCTCCAGAAAACCCCAAAGGACAAAAATGCCTCTTTAGTCATACACGGGTTTGTCGATAAGGTAATTACTGGTGTCATGGAGTACCTTAATCTGAAGATTCCTCCTTTCATCAGGATTGACCTTTTCCAGATTATTGTAGTGCATGCTTTGAGCATTGATAAAAGATATGTGAACTGGACTCTCCAAGTTGCAAGTGCTCATGCCCAGAAAGCATCACTGCCTTTCATCAAGTCCGTCGAGGTTTCTTTCTTGGACAAGGAAGATTACAAAGCAGCCATTCTGGATAAGCAACCATTTCGACTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTTAAACTCAATTTTGGTGATGGCTGCGGTTGCTCGTCCCTTGAAATTGATGTCCCGATTGATTTTATGACATCAACTGACTGCTTCAACTTTGACAAGGATATCATTTTCCAAAAGCTGAGAGACAAAGCAGTTGTTGAATCAAAATGTGGTCAGAATGCTGTTATTGAGAGAAAGACAATCTTGACACCAAAAAGTGATGTTACTACCTATGCTATCGTCACGAATGTTGTTCATTACAGCAATGCAGTCCCTGATTCTCTAACAAATGGCGATCTTAAAAAGAGAAAAGAAAGCACGACAGGTACAGGATCGTCTAAGAAGCGTTCAAAAGTTTCCAAGGGTAAATCTATATCAAAAAAGTCTTAG 1416 0.4117 MSLGYAEKLSFIEDVGNVGMTEHFDSSHVLREKIERLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAMPSLTHMALVELEKNGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGAEYFRDFEVETIGLKETSRRCSDEKCGTRLKDTVLDWEDALPPKEMDPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKNASLVIHGFVDKVITGVMEYLNLKIPPFIRIDLFQIIVVHALSIDKRYVNWTLQVASAHAQKASLPFIKSVEVSFLDKEDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFGDGCGCSSLEIDVPIDFMTSTDCFNFDKDIIFQKLRDKAVVESKCGQNAVIERKTILTPKSDVTTYAIVTNVVHYSNAVPDSLTNGDLKKRKESTTGTGSSKKRSKVSKGKSISKKS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01133 471 Gene3D - 135 184 - -
Car05g01133 471 MobiDBLite consensus disorder prediction 439 453 - -
Car05g01133 471 SUPERFAMILY DHS-like NAD/FAD-binding domain 6 292 IPR029035 -
Car05g01133 471 Gene3D - 37 262 - -
Car05g01133 471 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 1 466 - -
Car05g01133 471 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 1 466 - -
Car05g01133 471 MobiDBLite consensus disorder prediction 437 471 - -
Car05g01133 471 ProSiteProfiles Sirtuin catalytic domain profile. 35 269 IPR026590 -
Car05g01133 471 Pfam Sir2 family 87 216 IPR003000 GO:0070403
Car05g01133 471 Pfam Sir2 family 52 75 IPR003000 GO:0070403
Car05g01133 471 CDD SIRT7 45 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01133 Car-Chr5 53688789 53699344 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01133 K11416 - gmx:100803586 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01133 05 53688789 53699344 Car05g01133 05 53688789 53699344 ECH