Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01132 ATGTCAGTGGCAGCTAGTCCAGCAGCCTCTTTAGGGGATCATTTATGTGAAAATGGATTTGAATGTGTTGAAATTCTCCCTGCCACCAATGATGCACATGGAGGAGTCATTGTCTACTTGAAGGATCCTATGGACCCTCAAGTTTTTGCTTCTTTGCTTAAATCTTCACTTTTACAATGGAAGAAACAGGGAAAAGATGGAGTCTGGATCAAGTTACCTATTGAGCTTGTTAATCTTGTCGAAATTGCAGTTAAGGAGGGTTTCTGTTACCATCATGCTGAGCCAAACTATGTAATGTTAGTTTACTGGATTCCTAAAACAGGCTGCACAATCCCTCCAAATGCTTCTCATCGTGTAACTGTTGCTGCCATTGTCTTGAATGATAACAAAGAGATGCTTGTAGTCAAGGAAAAAAGAGGTAGATTCCATGGAATTGGTGTTTGGAAGCTACCTACTGGAGTAGTTGATGCAGGTGAGGATATTTTTGAAGCAGCTGTTAGAGAAGTAAAAGAAGAGACAGGAGTTGATACACAATTTGTGGAGATACTAGGATTCAGTCAAGCACACAATTCATTTTTTGGAAAATCAGATCTATCTTTTCTTTGTATGTTGCATCCACTTTCTTTTGACATCAAAAGGCAAGAATTGGAAATTGAAGCAGTTCAGTGGATGCCGTTTGAAGAATATGCAGTTCAACCTTTTAATCAGAAGCATGAGCCCTTCAAGTATATAACTGAATTATGCATGGCAAAGATAGAAAAAGGCTACACTGGATTCTGTCCAAGGCCAGTCTCATCATTTTTTTCTAAAGATTTGAGTTGCATATACTTGAATAGCAAAGACTTTGACAAATCTTGTTGA 861 0.3844 MSVAASPAASLGDHLCENGFECVEILPATNDAHGGVIVYLKDPMDPQVFASLLKSSLLQWKKQGKDGVWIKLPIELVNLVEIAVKEGFCYHHAEPNYVMLVYWIPKTGCTIPPNASHRVTVAAIVLNDNKEMLVVKEKRGRFHGIGVWKLPTGVVDAGEDIFEAAVREVKEETGVDTQFVEILGFSQAHNSFFGKSDLSFLCMLHPLSFDIKRQELEIEAVQWMPFEEYAVQPFNQKHEPFKYITELCMAKIEKGYTGFCPRPVSSFFSKDLSCIYLNSKDFDKSC 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01132 286 PANTHER NUDIX HYDROLASE 2 18 284 - -
Car05g01132 286 CDD Nudix_Hydrolase_12 117 248 - -
Car05g01132 286 PRINTS NUDIX hydrolase family signature 148 162 IPR020476 -
Car05g01132 286 PRINTS NUDIX hydrolase family signature 162 177 IPR020476 -
Car05g01132 286 ProSiteProfiles Nudix hydrolase domain profile. 116 248 IPR000086 -
Car05g01132 286 PANTHER NUDIX HYDROLASE RELATED 18 284 IPR003293 -
Car05g01132 286 SUPERFAMILY Nudix 84 246 IPR015797 -
Car05g01132 286 ProSitePatterns Nudix box signature. 153 174 IPR020084 GO:0016787
Car05g01132 286 Pfam Nudix hydrolase domain 26 104 IPR040618 -
Car05g01132 286 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 76 94 IPR003293 -
Car05g01132 286 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 114 132 IPR003293 -
Car05g01132 286 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 202 226 IPR003293 -
Car05g01132 286 Pfam NUDIX domain 117 241 IPR000086 -
Car05g01132 286 Gene3D - 22 108 - -
Car05g01132 286 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 118 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01132 Car-Chr5 53669116 53673704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01132 - - gmx:100783941 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01132 05 53669116 53673704 Car05g01132 05 53669116 53673704 ECH