Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01131 ATGCAGCACCTGCTCCGACCACCAACTCTAGCCGCCTTCACGGCGGCTCTACTCTTCATCTCCGCCATATTCTCAACCTCCAATGCACAGAACATCACACGCATTCTCGAAAAACACCCCGAATTCTCCACCTTCAACCACTATCTAACCCTAACACACCTCGCTCTAGAAATCAATACGCGTACAACAATCACCGTCTGCGCCGTCGACAACTCCGCCATGACCAATCTCCTCGCGAAACACCCGTCGATCTCCACCATAAAAAACATCCTCTCCCTCCATGTCCTCCTCGACTACTTCGGAGCCAAAAAGCTTCACCAAATCACAAACGGAACCGCACTCGCCGCCACATTGTACCAGGCCACAGGCTCTGCACCTGGTTCATCGGGATTTGTTAACATTACCGATCTTCGCGGTGGGAAAGTCGGATTTGGAGCGGAAGATAACAACGGTGCTCTACCCGCTTTGTATGTTAAATCCGTTGAAGAAATACCTTACAACATTTCAGTTATTCAGATTAGTCAAATTCTTCCCTCGCCTGCAGCAGAAGCTCCTACACCCGCACCTAGCCAACAAAACCTCACAGCTATTATGTCCGTACACGGTTGTAAAATCTTCGGTGACACGCTTTCTGCTTTTCATGAAGCTTATAGCACTTTTACCGATAACATTGACGGTGGATTAACCGTTTTCTGTCCCGTCGACAATGCTTTCAAAGCTTTCCTTCCCAAATTCAAAAACCTAACCGCCGCTGGTAAACTTGCGCTTCTCGAATTTCACGGCGTTCCGGTTTATCAAACGATTGCGATGCTGAAATCAAACAATGGACTTATGAATACGCTTGCTACTGATGGTGCTGAGAAGTACGATTTCTCTGTTCAAAATGATGGTGACCAGATCACGTTGAAGACGAAAGCTGTAACGGCGAAGGTAACCGATACGATCATTGATGATGTTCCGCTTGCGATCTATGCTATTAATAAGGTTCTTCTTCCGGAGGAGTTGTTTAAGGGTAAAgctccgagtccttctccggctccggcgccggcgcctgctgctgacgcTCCTGAGGCGCATaagaagaagaagaagaagaagGTGGCTGATGCGCCAGAGCCGGCTGATTCACCGGCTGAATCACCGGAAGATGCAGCTGATGACACTGGCGATGACAGTGACGGCGCCGTTAGGTTTGACGGTATCGTTGTTACGGTTTTGTCTTTAGTTTTCGGGTTTCTAATGCTTTGA 1248 0.4527 MQHLLRPPTLAAFTAALLFISAIFSTSNAQNITRILEKHPEFSTFNHYLTLTHLALEINTRTTITVCAVDNSAMTNLLAKHPSISTIKNILSLHVLLDYFGAKKLHQITNGTALAATLYQATGSAPGSSGFVNITDLRGGKVGFGAEDNNGALPALYVKSVEEIPYNISVIQISQILPSPAAEAPTPAPSQQNLTAIMSVHGCKIFGDTLSAFHEAYSTFTDNIDGGLTVFCPVDNAFKAFLPKFKNLTAAGKLALLEFHGVPVYQTIAMLKSNNGLMNTLATDGAEKYDFSVQNDGDQITLKTKAVTAKVTDTIIDDVPLAIYAINKVLLPEELFKGKAPSPSPAPAPAPAADAPEAHKKKKKKKVADAPEPADSPAESPEDAADDTGDDSDGAVRFDGIVVTVLSLVFGFLML 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01131 415 SUPERFAMILY FAS1 domain 186 333 IPR036378 -
Car05g01131 415 ProSiteProfiles FAS1/BIgH3 domain profile. 29 177 IPR000782 -
Car05g01131 415 MobiDBLite consensus disorder prediction 339 393 - -
Car05g01131 415 Gene3D FAS1 domain 27 173 IPR036378 -
Car05g01131 415 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 402 IPR033254 -
Car05g01131 415 ProSiteProfiles FAS1/BIgH3 domain profile. 190 330 IPR000782 -
Car05g01131 415 SMART fasc_3 229 333 IPR000782 -
Car05g01131 415 SMART fasc_3 65 180 IPR000782 -
Car05g01131 415 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 11 402 - -
Car05g01131 415 SUPERFAMILY FAS1 domain 35 177 IPR036378 -
Car05g01131 415 Pfam Fasciclin domain 219 332 IPR000782 -
Car05g01131 415 Pfam Fasciclin domain 40 110 IPR000782 -
Car05g01131 415 Gene3D FAS1 domain 205 332 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01131 Car-Chr5 53663815 53665631 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01131 - - cam:101502229 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01131 05 53663815 53665631 Car05g01131 05 53663815 53665631 ECH