Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01111 ATGATTGTTCTTCTTCTTTGTCGCTCTCTCACTTCCTCCTTATATAAGACTTCCCCTTTCACTCATTCCCCAAATCAATTCAAACCCATTTTTCTTCTTCACCCTAAGTTTCAATCTTTATACCCTTTTTCTTCATCCATGGCTACTTGTGTTGATGCTTCAACCCCTCCTCTTTCTCGCAAACCTAACGTTTCACAATCCGATGATTGTTCATTCAACTTCGTCAATTTTTGTCGACCCAATTTCTCTGATCGTGTTTCCTCGGTACCCATTTGTAAGAATCGTGAAAAAGTCTTGCACACAAAAACTGTATTGGTTGAAGATTTAGAGCATGACCAAGATGATGCAAAAGTTGATAATCTCGATGAAATTGAGGTTGTTGATTTTTGGTTGAAGATTCAGGAAGAAGCAAGGTTAGATTTGGATCAAGAACCAATTTTATCTAGCTATTATTTCAGTTCCATTTTATCTCACAATTCATTGGAAAGTGCTTTGGCTAATCAACTATCAATTCATTTGAGTAATTTGAGTCTTTCTAGCACTACCCTTTTTGATCTTTTCATGAGTGTTTTGGTTAATGATGATGAAATATTGAATACTGTGAAAGATGATTTGAAAGCAGTGAAAGAAAGAGACCCTGCTTGTATAAGCTATGTTCATTGTTTATTGAATTTCAAAGGGTTTTTAGCATGTCAAGCTCATAGGATAGCTCACAAATTATGGTTACAAGGGAGAAAAGTTTTGGCACTTTTGATTCAGAATAGAGTTTCTGAGGTTTTTGCTGTTGATATTCATCCTGGTGCTAAGATTGGAAGAGGGATTTTGTTGGATCATGCAACGGGACTTGTTGTTGGTGAAACAGCTGTGATTGGTAACAATGTTGCAATTTTGCATAATGTTACATTAGGTGGAACAGGTAAAGTTTGTGGTGATAGACATCCAAAGATTGGTGATGGTGTGTTGATTGGTGCAGGGACATGTATTTTGGGGAATATTAAGATTGGTGATGGTGCTAAGATTGGTGCTGGTTCTGTTGTTTTGAAAGATGTTCCACCAAAAACTACTGCTGTTGGAAATCCAGCTAAGTTGATTGGTGGAAAAGATAACCCTATCATGTTGGATAAGATTCCTAGCTTTACTATGGACCATACTTCATATATATCTGAGTGGTCTGATTATGTTATCTAG 1188 0.3662 MIVLLLCRSLTSSLYKTSPFTHSPNQFKPIFLLHPKFQSLYPFSSSMATCVDASTPPLSRKPNVSQSDDCSFNFVNFCRPNFSDRVSSVPICKNREKVLHTKTVLVEDLEHDQDDAKVDNLDEIEVVDFWLKIQEEARLDLDQEPILSSYYFSSILSHNSLESALANQLSIHLSNLSLSSTTLFDLFMSVLVNDDEILNTVKDDLKAVKERDPACISYVHCLLNFKGFLACQAHRIAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGNNVAILHNVTLGGTGKVCGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKDVPPKTTAVGNPAKLIGGKDNPIMLDKIPSFTMDHTSYISEWSDYVI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01111 395 PANTHER SERINE ACETYLTRANSFERASE 47 395 - -
Car05g01111 395 SMART SATase_N_2_a 129 233 IPR010493 GO:0005737|GO:0006535|GO:0009001
Car05g01111 395 Gene3D Hexapeptide repeat proteins 263 377 - -
Car05g01111 395 PANTHER SERINE ACETYLTRANSFERASE 47 395 - -
Car05g01111 395 TIGRFAM cysE: serine O-acetyltransferase 201 362 IPR005881 GO:0005737|GO:0006535|GO:0009001
Car05g01111 395 Pfam Bacterial transferase hexapeptide (six repeats) 313 347 IPR001451 -
Car05g01111 395 Gene3D serine acetyltransferase, domain 1 114 262 IPR042122 -
Car05g01111 395 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 322 350 IPR018357 GO:0016740
Car05g01111 395 Pfam Serine acetyltransferase, N-terminal 130 233 IPR010493 GO:0005737|GO:0006535|GO:0009001
Car05g01111 395 CDD LbH_SAT 260 360 IPR045304 -
Car05g01111 395 SUPERFAMILY Trimeric LpxA-like enzymes 129 365 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01111 Car-Chr5 53023537 53025323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01111 129 383 Miscellaneous Gene Families AT2G17640 56.078 1.33e-93 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01111 K00640 - gmx:606507 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01111 05 53023537 53025323 Car05g01111 05 53023537 53025323 ECH
Car05g01111 05 53023537 53025323 Car02g02124 02 51583505 51584888 PCT