Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01090 ATGTCATCAAACCAGAACCTAAAAGAACTACAATGGTTTCTCCAAGCAATCAACATGGAAAACCAAAACCTACACAGCATTTCCTTCTACCTTTTCCAACCAACTTCAAATTGTTACCAAGAAACAAACAACTCCATAAACATAAACATTTCCAAAGAAAATCTAAACCACTTTTCCAGCTTCTTAACAAAACTATCAGAATCCAACAACACCAAATCCACATTGAGAAACTTAGAGTTCCACAGAGTTGAATGGAACTCACAACAGGTAAGAAACCTTGAAACTCTTCTTAGTAATCACCAATGTGTAAAACAACTTGTTTTTAGAAGAAACAGATTCAATGACAAAAGCATGTTAGATTTTTCTGAGATTTTGAAGAGAAATAAAGTGATTAAAGAGATTATGATTTCAGAATCATGTATTGGTTCTATTGGTGCTGGATTAATTGCTTCTTCTCTTATGGTGAATCATAGTTTGGAAGAGTTGCAAATATGGGAAGATTCAGTAGGTTCAAGAGGTGCTGAAGAGATTTCAAAGATGATTGAAGTTAATCCAAATCTTAAATTGTTGACAATTTTTGACTCAAATGATATCATAGCTACACCTCTTATATCTTCAGTTTTGGCAAGGAATAGAGCTACGGAAGTTCATGTTTGGTGTGGTGAAAAAAATGGTGAAAAATGTTCAAAAGTTGTTGAATTTGTTCATGGTAATAGTACACTTAGAATTTACAAGCTTAACCTCTCAGGTACTTGTAGGGTTGCTTGTTCTTTAGGAATGAATTTCACTGTTAAATCACTTGACATGACTGGTGTCAAGATTAAATCCAAGTGTGCTAAGGAATTTAGATGGGTTTTGGAACAAAACCAAACACTAAAAGAGGTTAACTTTTCAAGAACATGTCTTAAAGATAAGGGCATTGTGTATGTTGCAGCTGGACTATTTAAGAATCATAGTCTGCAAACTTTGCATTTAACTGGAAATTTATTCGGCGGAATAGGCGTCGAGCATTTACTTTGTCCTATAAGTAGGTTTTCATCTTTGCAAATGCAAGCTAACATTAGTTTGAAGTGTGTTACTTTTGGTGGAGGGAGAAGAAGAATAGGAAGGGATGGTTTAGCAGCTATAACACAGTTTTTAATAACGAATGAGACAGTGACACGGTTCGGGATACATGATGATGAGAGTTTGAGACCAGATGATTTTGTTAAAATCTTTAAGAGCTTAGAGAAGAATGCTAGCTTGAAATGTTTGTGTTTGCAAGGGTGCAAAGGTGTTCAAGGAGAGACATTGCTGCAGACAATTTTGGAGACATTGCATATAAATCCTTGGATTGAAGAAATTGATCTATCAAGAACACCTTTACATAATTCTGGAAAGACTACGGGGATTTATCAAAGATTAGGGCAGAATGAGAATCCTGAACCTGAAATGGATTTGCTCAAAGATATGCCACTCACTGAGCCCAAGAGTTGCAGAGTTTTCTTCTGTGGGCAAGAATATGCAGGGAAAACCACACTTTGTCATTCGATATTACAAAACTTCTGTGCCTCGACGCTTCCCTACTTGGATCAAGTAAGAACAATAGTGAATCCAATGGAGCAGGATGTCAAAACAGTAGGAATTAAGATAAAAACATTCAAGGATGAGGATACAAAGATTTCAATTTGGAATCTTGCTGGTCAGCATGAGTTTTTCTCCCTTCATGATCTTATGTTCCCGGGGCATGGTAGTGCTTCAATTTTTGTTATCATATCGAGTTTATTCAGGAAGCCGAGCAACAAAGAACCAAAAAGCACTGCAGAGATTGAAGAGGACCTGCAATATTGGCTAAGGTTCATAGTTTCCAACTCCAAAAGAGCAGTACAACAATGCATGCTACCAAGTGTAGCTGTTGTTCTTACACACTTTGATAAAATCAACCAATCATCTCAAAATCTGCAGCAAACAGTTGATTCAATTCAAAGATTGAGAGACAAGTTTCAAGGCTATGTTGAATTCTATCCAACTGTATTCACAGTTGATGCAAGATCATCTGCATCGGTTAGTAAACTCACTCATCATATTCGAAAGACGTGCAAAACAATCCTCCAAAGAGTACCGCGAGTTTATCAACTTTGCAATGATCTAATACATATTTTATCACAATGGAGGTCAGAGAATTACAACAAACCGGCAATGAAGTGGAAGGAGTTTGGTGAGCTGTGTCAAGTAAAAGTCCTGCCTTTGAGAATCCGATCGAGACATTATAATAAAGAGGCGGTGGAAATGAAGCGAAGAGCTGTTGCTACTTGTCTTCATCACATTGGTGAAGTGATTTATTTTGATGAGTTGGAGTTTCTAATATTGGATTGTGAGTGGTTCTGTGGTGAAGCACTTGGTCAGCTCATAAAGTTGAATGTTAGAAAGCAACAGTCTTCAGAAAACAATGGATTCATTAGTAGGAAGGAATTGGAGAAAATCTTAAGAGGAAGTTTACAAAGTCCAATGCCTGGTATGGGATCAAAGGTATTTGAGAACTTAGATGCTAGTGACCTTGTGAGAATGATGCTTAAACTTGAACTTTGTTATGAGCAAGATGCATCAGATCAAAATTCTCTACTTTTGATTCCTTCCATTCTTGAAGAAGGTAGAGGAAAGCCTCAGAGATGGCAGATAAGCTCATCAGACTGCCTTTATGCCGGACGCCATCTCAAATGTGATGATTCAAGTCATATGTTTCTAACACCGGGATTCTTCCCTCGCTTACAGGTTCACCTTCACAACAGAATAAAGGCTCTAATGAGTCAACATGGCGCAACTTACAGTCTTGGGAAGTATCTCATTTCAATCAGCATCAATGGAGTTTACATCCGAGTTGAGCTTGGAGGACAACTTGGTTACTATATCGACGTCCTGGCGTGCTCCACCAAGAACTTGACAGAAACTTTAAGAGTTATTCAGCAACTTATAATCCCGGCAATTCAAAGTGTTTGCCACGGTATCACCATGACTGAAAATATCATTAGACCGGAATGCGTGCGAAATTTGACACCACCAAGATACAGAAGAACTCAGTGTGCACCTCTGCAGCAACTGAAACAAGCACTACTTTCACTTCCAGCAGACAGCATGTATGATTATCAATACACATGGAGTTCGGTCTTGGATTCCGGCAGGCCTATTCTCCAAGAAGGGTTTGATTTTGCTCGAGACCTTTTATCAGATGATGACTTCCGGGAAGTGCTGCATCGCAGGTATCATGACCTCCACAATCTTGCTCAGGAGCTGCAAATCCCAAATGAAAATAACCCTCAAGAGCAAGATCAGCCTATAACAATAAGCAATGAAGCTGAAAAAGTTGAGCCAAGTTTTGGTGGCATTGCAAAAGGAGTTGAAGAAGTTTTACAACGACTCAAAATTATTGAACAAGAAATTAGAGACTTGAAGCAAGAAATCCAAGGACTTAGATATTACGAACACAGACTCCTACTCGAGCTTCATCGAAAAGTGAATTACATAGCAACCTTCAATGCTCAAGTTGAGGAGAGGAAAGTACCTAACATGTTCTATTTCGTAAAAGCAGAAAACTACTCAAGGAGACTGATCACCACCATGGTTTCTGGCATGACCGCCCTCCGGCTTCACATGTTATGTGAGTTCCGGGGACAAATGCACGTTGTTGAAGATCAGATGGGATGCGAAATGATGCAAGTTGATAACATGGCTGTGAAGTCTTTAGCTCCATATATGAAAAAGTTCATGGTAATGGTAACTTTTGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGAATGGGGGAAATGATACCGGATTTGAGCAAGGAAGTGGCTCATTTGGCTGGCTCTTTGCTTCTCTTTGGTGCAGTTGGTGCAACTGCAGCAGGCGCTGTAGGGGCTGCAGCTATCGGTTGTAGAAACAGGTCCGCAGAAGGTTCAAGGGGCATTCAACAAGACATAAAAGCTGCACAACAATGGATGGTTGATTTCTTAAGGGAAAGGAGGTGCTCCACAGGGAAGGATATTGCAGAGAAATTTGGACTGTGGCGAGTAAGGTACAGGGACAATGGTCAGATTGCATGGATCTGTAGGAGACACATGTATGCAAGATCTGCAGAGATAATTGAAGTGCCTATTTGA 4137 0.3926 MSSNQNLKELQWFLQAINMENQNLHSISFYLFQPTSNCYQETNNSININISKENLNHFSSFLTKLSESNNTKSTLRNLEFHRVEWNSQQVRNLETLLSNHQCVKQLVFRRNRFNDKSMLDFSEILKRNKVIKEIMISESCIGSIGAGLIASSLMVNHSLEELQIWEDSVGSRGAEEISKMIEVNPNLKLLTIFDSNDIIATPLISSVLARNRATEVHVWCGEKNGEKCSKVVEFVHGNSTLRIYKLNLSGTCRVACSLGMNFTVKSLDMTGVKIKSKCAKEFRWVLEQNQTLKEVNFSRTCLKDKGIVYVAAGLFKNHSLQTLHLTGNLFGGIGVEHLLCPISRFSSLQMQANISLKCVTFGGGRRRIGRDGLAAITQFLITNETVTRFGIHDDESLRPDDFVKIFKSLEKNASLKCLCLQGCKGVQGETLLQTILETLHINPWIEEIDLSRTPLHNSGKTTGIYQRLGQNENPEPEMDLLKDMPLTEPKSCRVFFCGQEYAGKTTLCHSILQNFCASTLPYLDQVRTIVNPMEQDVKTVGIKIKTFKDEDTKISIWNLAGQHEFFSLHDLMFPGHGSASIFVIISSLFRKPSNKEPKSTAEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKINQSSQNLQQTVDSIQRLRDKFQGYVEFYPTVFTVDARSSASVSKLTHHIRKTCKTILQRVPRVYQLCNDLIHILSQWRSENYNKPAMKWKEFGELCQVKVLPLRIRSRHYNKEAVEMKRRAVATCLHHIGEVIYFDELEFLILDCEWFCGEALGQLIKLNVRKQQSSENNGFISRKELEKILRGSLQSPMPGMGSKVFENLDASDLVRMMLKLELCYEQDASDQNSLLLIPSILEEGRGKPQRWQISSSDCLYAGRHLKCDDSSHMFLTPGFFPRLQVHLHNRIKALMSQHGATYSLGKYLISISINGVYIRVELGGQLGYYIDVLACSTKNLTETLRVIQQLIIPAIQSVCHGITMTENIIRPECVRNLTPPRYRRTQCAPLQQLKQALLSLPADSMYDYQYTWSSVLDSGRPILQEGFDFARDLLSDDDFREVLHRRYHDLHNLAQELQIPNENNPQEQDQPITISNEAEKVEPSFGGIAKGVEEVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNYIATFNAQVEERKVPNMFYFVKAENYSRRLITTMVSGMTALRLHMLCEFRGQMHVVEDQMGCEMMQVDNMAVKSLAPYMKKFMVMVTFALKIGAHLAAGMGEMIPDLSKEVAHLAGSLLLFGAVGATAAGAVGAAAIGCRNRSAEGSRGIQQDIKAAQQWMVDFLRERRCSTGKDIAEKFGLWRVRYRDNGQIAWICRRHMYARSAEIIEVPI 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01090 1378 Coils Coil 640 660 - -
Car05g01090 1378 Pfam Leucine Rich repeat 316 338 IPR001611 GO:0005515
Car05g01090 1378 Pfam Leucine Rich repeat 288 309 IPR001611 GO:0005515
Car05g01090 1378 Pfam Ras of Complex, Roc, domain of DAPkinase 493 619 - -
Car05g01090 1378 SUPERFAMILY RNI-like 47 460 - -
Car05g01090 1378 Pfam C-terminal of Roc, COR, domain 757 926 IPR032171 -
Car05g01090 1378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 478 684 IPR027417 -
Car05g01090 1378 Gene3D Ribonuclease Inhibitor 56 217 IPR032675 -
Car05g01090 1378 Gene3D Ribonuclease Inhibitor 353 475 IPR032675 -
Car05g01090 1378 Gene3D Ribonuclease Inhibitor 221 352 IPR032675 -
Car05g01090 1378 Gene3D - 491 696 IPR027417 -
Car05g01090 1378 Coils Coil 1125 1152 - -
Car05g01090 1378 PANTHER PROTEIN TORNADO 1 1 1371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01090 Car-Chr5 52510683 52515986 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01090 - - mtr:MTR_3g055970 2466.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01090 05 52510683 52515986 Car05g01090 05 52510683 52515986 ECH