Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01086 ATGGGATTCTCGTTGGTAGTTCCGTTTGGTTCCGCTATTGCGTTCAGAGCTACTCATGAAACCAGAATCAACTTCAACAAATTATTCTGCACAAAACAACACAACAACGTTACTCACACACCAATTTTTGTAACCAAGCAAAATTCAATTGAGTTGGATATTGATCGGAAAAGCCCAAATCAGGTTAAAGAAGAGATCAAACAATGTTATGAACTCATAAACCGATTAGGAAGAGGAATTGTGTATCTAGGTTCTTCTCGGATGGGCTCGAGCCATTCACATTATATGCAATCACAAGAATTGGCAAAAGAGGCAACAAATCTTTTGGACTGCACTACATGGTCAGGGGCTGGACCGGGATTAATGGATGCTGTTACTCAAGGTGCTCTTCTGGCAGGGAAACCAGTTGGTGGATTCAAGATAGGAAGAGAAGCTGGAGAATGGACAGCTTCCAACTTTCATCCATACTTACCATCAGAAAGTTACCTTACCTGCAGGTTTTTCTCTGCAAGGAAGCACGGACTGGTCGATGCCGTAGTGAGAAACAATCCATTCGATAAAACTGCCGTTGTTGCACTTCCCGGTGGAATTGGTACGCTAGATGAGTTGTTTGAAATGCTGGCATTAATTCAGCTAGAACGGATCGGATCAAAGCTTCCTGTTCCCTTCCTGTTGATGAACTATGATTCATTTTATTCGAAACTGCTAGACTTTTTAGATGTTTGTGAGGATTGGGGAACTGTCTCTAAAGGAGAGGTTGCATCATTATGGAAGTTGCTTCCAATAGCTCGTGATCATGTTTTTCCACTATTAAAAGAAGCAACCAATATGATAAGAGGTGTCCCGAAAGAAGTTGCAGACATGAAAGATGAACTAGAAAGCATGGAAGACTTCATCAAAAATGCAGATAGAATGGCAGAAGCTGAAGAAGACAATTCGCGAGACGGAATCGAAGCAAGGATCAAGCAGCTCAGACAAGCATCTTTTCGCATACAAGATGTTCCAACATTTTACTGTCAAGTTATGTTGAATGTTCAAACATTGCATGTTTTTAGACATAAAGAGTTACCTGATACCTTTGTGAAAACTATCCCTTCAAAGTACAGAAGAGGCCAAGAGGAGCAAAGTACGCACCGAGAAATAGCATATATGAATGTAGTTTTAGTGGGGAATGGCATGCTCAAGACTGCCCCAGGAGGAAGGACTAAGAAGAATTTTTTGCATGAAATGTTTATCATCTTGATTTCTAAGAAGAAAGCACTACGAGCTTTACTTACCCAAAAGAAAATCCCAGGGGTAAAGACAAGAATTCAATGGTGTACTGCTATATAA 1332 0.4062 MGFSLVVPFGSAIAFRATHETRINFNKLFCTKQHNNVTHTPIFVTKQNSIELDIDRKSPNQVKEEIKQCYELINRLGRGIVYLGSSRMGSSHSHYMQSQELAKEATNLLDCTTWSGAGPGLMDAVTQGALLAGKPVGGFKIGREAGEWTASNFHPYLPSESYLTCRFFSARKHGLVDAVVRNNPFDKTAVVALPGGIGTLDELFEMLALIQLERIGSKLPVPFLLMNYDSFYSKLLDFLDVCEDWGTVSKGEVASLWKLLPIARDHVFPLLKEATNMIRGVPKEVADMKDELESMEDFIKNADRMAEAEEDNSRDGIEARIKQLRQASFRIQDVPTFYCQVMLNVQTLHVFRHKELPDTFVKTIPSKYRRGQEEQSTHREIAYMNVVLVGNGMLKTAPGGRTKKNFLHEMFIILISKKKALRALLTQKKIPGVKTRIQWCTAI 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01086 443 Pfam Possible lysine decarboxylase 122 260 IPR031100 -
Car05g01086 443 SUPERFAMILY MCP/YpsA-like 68 251 - -
Car05g01086 443 Pfam Rx N-terminal domain 266 334 IPR041118 -
Car05g01086 443 Gene3D - 268 375 - -
Car05g01086 443 Coils Coil 285 312 - -
Car05g01086 443 Gene3D - 58 267 - -
Car05g01086 443 PANTHER EXPRESSED PROTEIN 39 259 - -
Car05g01086 443 PANTHER EXPRESSED PROTEIN 39 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01086 Car-Chr5 52473560 52478128 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01086 - - cam:101498309 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01086 05 52473560 52478128 Car05g01086 05 52473560 52478128 ECH