Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01060 ATGCTTTCCCTAAAAACCCCCAATAAGCTACTCTCATCCTCTTCCATTCCCACTCCAATTTCTCACACTGCACTCTCTTCTTCTTCCTCTTTCGCTGTCAGAAACTGTATTTCACTGAACCCTATATTAACAACAAGCAATACCGAATCCCCGCGACGACGTTTTAGGCCGGTTAACTGCTCCTTTTCATCCATAGACAATGCTAAGATTAAGGTtgttggtgttggtggtggtggtAACAATGCCGTTAACCGCATGATTGGTTGCGGATTACAGGGTGTAGACTTTTATGCTATAAATACTGATGCTCAAGCACTGTTGCATTCTTCTGCTGAGAACCCTATCAAAATTGGAGAACTCCTGACTCGTGGATTAGGTACTGGTGGTAATCCACTTTTGGGGGAACAAGCTGCCATGGAATCTAAAGAAACTATTGCTAATGCTCTTCATGGCTCAGATTTAGTGTTTGTAACTGCCGGTATGGGTGGAGGAACGGGGTCTGGTGCTGCCCCTGTCGTGGCCCAAATATCAAAAGAGGCTGGTTACTTGACCGTAGGTGTTGTTACCTATCCCTTCAGTTTTGAAGGACGCAAAAGATCCTTGCAGGCTCTAGAAGCCATCGAAAAGCTGCAGAAAAACGTGGATACACTTATAGTGATTCCAAATGACCGTCTGCTTGACATAGCCGATGAGCAGACCCCTCTTCAGGATGCTTTCCGTCTTGCCGATGATGTACTACGACAAGGAGTACAGGGAATATCAGACATCATAACTATACCTGGTCTTGTAAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGAACTGCAATGCTTGGAGTAGGTGTTTCGTCGAGTAAAAATCGTGCAGAAGAAGCTGCAGAACAGGCTACTTTGGCACCTTTAATTGGATCATCTATTCAGTCAGCCACTGGGATAGTGTACAATATTACCGGAGGAAAAGACATAACTCTGCAGGAAGTGAATAGAGTGTCTCAGGTTGTGACAAGTTTAGCCGATCCTTCTGCCAATATTATATTTGGGGCCGTTGTTGACGATCGCTACAATGGTGAGATTCATGTGACTATCATTGCAACTGGCTTCTCACAGTCCTTCCAAAAGATGCTACTAACAGATCCAAGGGCTGCAAAGCTTCTTGACAGATTACCTGGAGGCCAAGAAAGCAACCAAAAGTCCCCTCTTCTCAAGACCTCAAACTTTTCATCAACAGTTGCGTCTAAAGCATCCCCACGAAAGCTCTTCTTTTAG 1278 0.4366 MLSLKTPNKLLSSSSIPTPISHTALSSSSSFAVRNCISLNPILTTSNTESPRRRFRPVNCSFSSIDNAKIKVVGVGGGGNNAVNRMIGCGLQGVDFYAINTDAQALLHSSAENPIKIGELLTRGLGTGGNPLLGEQAAMESKETIANALHGSDLVFVTAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQTPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGIVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKMLLTDPRAAKLLDRLPGGQESNQKSPLLKTSNFSSTVASKASPRKLFF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01060 425 SUPERFAMILY Tubulin C-terminal domain-like 263 377 IPR008280 -
Car05g01060 425 PRINTS Cell division protein FtsZ signature 154 174 IPR003008 GO:0005525
Car05g01060 425 PRINTS Cell division protein FtsZ signature 182 203 IPR003008 GO:0005525
Car05g01060 425 PRINTS Cell division protein FtsZ signature 245 267 IPR003008 GO:0005525
Car05g01060 425 PRINTS Cell division protein FtsZ signature 268 289 IPR003008 GO:0005525
Car05g01060 425 SUPERFAMILY Tubulin nucleotide-binding domain-like 68 264 IPR036525 -
Car05g01060 425 SMART Tubulin_4 69 261 IPR003008 GO:0005525
Car05g01060 425 Gene3D Tubulin/FtsZ, GTPase domain 61 276 IPR036525 -
Car05g01060 425 Gene3D - 277 382 IPR037103 -
Car05g01060 425 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 5 425 - -
Car05g01060 425 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 162 168 IPR017975 GO:0005525|GO:0005874|GO:0007017
Car05g01060 425 Pfam Tubulin/FtsZ family, GTPase domain 69 229 IPR003008 GO:0005525
Car05g01060 425 TIGRFAM ftsZ: cell division protein FtsZ 65 377 IPR000158 GO:0003924|GO:0005525
Car05g01060 425 ProSitePatterns FtsZ protein signature 1. 100 134 IPR020805 GO:0005525
Car05g01060 425 Pfam FtsZ family, C-terminal domain 278 371 IPR024757 -
Car05g01060 425 CDD FtsZ_type1 85 370 IPR000158 GO:0003924|GO:0005525
Car05g01060 425 ProSitePatterns FtsZ protein signature 2. 153 174 IPR020805 GO:0005525
Car05g01060 425 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 5 425 IPR045061 GO:0003924|GO:0005525
Car05g01060 425 Hamap Cell division protein FtsZ [ftsZ]. 65 399 IPR000158 GO:0003924|GO:0005525
Car05g01060 425 SMART Tubulin_C_4 263 380 IPR018316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01060 Car-Chr5 52087425 52090531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01060 K03531 - gmx:100809043 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01060 05 52087425 52090531 Car05g01060 05 52087425 52090531 ECH