Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01059 ATGCGGAGAATCGCATCGACTTCAATAGCGTGGGAAAACCTAATTGAAATCAAGATGAGTGTGATTCCAAAGGAAACAATTGAAGTCATTGCACAAACCATTGGCATCACCAATTTATCTTCCGATGTTGCCCTCGCTCTCGCCCCCGATCTCGAGTATCGCATTCGCGAAATCATGCAGGAGTCGATAAAATGCATGCGCCATTCTATGAGAACTTTTCTTACTGCTGATGATGTTGATACTGCTCTTGCATTGAGAAATTTAGAGCCGTTATATGGTTTCGCCTCTAATGATCCTCTGCGGTTCAAAAGAGCTGCTGGGCACAAGGATTTGTTCTACATTGATGACAAGGATGTGGATATTAAAGATGTGGTTGAAGCAGCTTTACCGAAAGTGCCCCTTGATACATCAATTACCAGTCATTGGTTGGCTATTGAAGGTGTGCAACCTGCAATTCCTGAAAACGCTCCAGTTGAAGCTCCCTCTGAGATAAGAAAAACTGAATATAAGGAAGACGCGCTTCCTGTTGATGTCAAATTACCTGTTAAACATATAATAACGATGGAACTTCAGCTTTACTATGAAAAAATAATTGAACTTTGTTTAAATAAGCCTGGCTCCATAACTTTTAGACGAGCATTGGTTACCTTGACAACTGACTCAGGACTCCATCCTTTGGTTCCTTATTTCACACGCTTTGTTGCTGATGAGGTGTCACGGAGTTTAAATAATATAAATATTTTATTTTCCTTGATGCGCCTTATGCGGAGCCTTTTGCAAAATCCTCACATACACATAGAACTTTATTTACACCAATTGATGCCACCTATCATTACTTGCATTGTTGCACAAACAATTGGAAACAGACTGTCTGATAATCACTGGGAGCTTAGGGACTTCAGTGCTAATCTTGTTGCTTTGATATGCAAAAGATTTGGGCATATGTATCACAATCTTCAGCCACGTGTGACAAAGACGTTTCTTCATTCTTTCTTGGACCCTACAAAAGCTTTACCTCAACACTATGGTGCAATTAAAGGAATAGCAGCTCTTGGATCAAGACTGGTTCGCTTGCTTATACTTCCAAATATCGAGCCATATTTGCATCTTCTTGAGCCAGAAATGCAACTTGAGAAGCAAAAAAATGAAATCAAAAGGCAAGAGGCATGGCAAGTCTACGGAGCCTTGCTGTGTGCAGTAGGTCAAACTATGCATGAAAAGGTCAAAACATTCAGCAGTTTGCTTTCTCCTCCAATTCGGGCTACTTCAAGAGGCGATGGAAAAGGAATGACTGTAAAATCAATTAAACATAAAGCCAGCAGCGTCAATCTAATGCTGCAGCCGCAATATGCACGGAGGAAAATGGCCGCAGATGGTGGTCGCAGTGCGCTGGTACCAATGAATTCCATGTCAGTCGACAACATGCAAGGCTCAACAAGTGGATTTTCCAACATGATGGGGGTTTCCAATTCTAACATTGCCATGTCATCATCATCGGTTCGTCAATTATCCAACGAAAACACTGCACGGAGAGAGGTTGAAGGTCAACAATGGAAGGAAGCTTCCTCTTCTATTCTAGCTCAGGCTTGGAAGGATGAGATAGATGCAGGACAATTGCTGCAACCATTGTCTGAATTATTCGGAGAAAGTTTGTTCTCATTTCTACCAACACATGCAACCTCTGTGTTTTTGTAA 1695 0.4153 MRRIASTSIAWENLIEIKMSVIPKETIEVIAQTIGITNLSSDVALALAPDLEYRIREIMQESIKCMRHSMRTFLTADDVDTALALRNLEPLYGFASNDPLRFKRAAGHKDLFYIDDKDVDIKDVVEAALPKVPLDTSITSHWLAIEGVQPAIPENAPVEAPSEIRKTEYKEDALPVDVKLPVKHIITMELQLYYEKIIELCLNKPGSITFRRALVTLTTDSGLHPLVPYFTRFVADEVSRSLNNINILFSLMRLMRSLLQNPHIHIELYLHQLMPPIITCIVAQTIGNRLSDNHWELRDFSANLVALICKRFGHMYHNLQPRVTKTFLHSFLDPTKALPQHYGAIKGIAALGSRLVRLLILPNIEPYLHLLEPEMQLEKQKNEIKRQEAWQVYGALLCAVGQTMHEKVKTFSSLLSPPIRATSRGDGKGMTVKSIKHKASSVNLMLQPQYARRKMAADGGRSALVPMNSMSVDNMQGSTSGFSNMMGVSNSNIAMSSSSVRQLSNENTARREVEGQQWKEASSSILAQAWKDEIDAGQLLQPLSELFGESLFSFLPTHATSVFL 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01059 564 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 19 564 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Car05g01059 564 CDD TAF6C 183 399 IPR011442 GO:0006367
Car05g01059 564 Pfam TATA box binding protein associated factor (TAF) 19 83 IPR004823 -
Car05g01059 564 Gene3D - 182 387 IPR046344 GO:0006367
Car05g01059 564 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 19 564 - -
Car05g01059 564 SMART TAF_cls 20 86 IPR004823 -
Car05g01059 564 SUPERFAMILY Histone-fold 17 83 IPR009072 GO:0046982
Car05g01059 564 SUPERFAMILY ARM repeat 191 406 IPR016024 -
Car05g01059 564 Pfam TAF6 C-terminal HEAT repeat domain 277 364 IPR011442 GO:0006367
Car05g01059 564 Gene3D Histone, subunit A 17 84 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01059 Car-Chr5 52079772 52086295 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01059 K03131 - gmx:100799998 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01059 05 52079772 52086295 Car05g01059 05 52079772 52086295 ECH