Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01055 ATGGGAGATAATGTTGTAGTGTCCTCCAATATGGAACTAGAAAGGTTGCTTAGCATGAAAGGTGGCAAAGGAGAAGCTAGCTATGCCAACAATTCACAAGCACAGGCCATACATGCAAAGTCCATGTTTCATCTTCTAAAAGAAGCACTAGATGGAATTGAGGTTGATGCACCAAAAATTCCATTTGTTGTAGTGGATTTGGGATGTTCATGTGGAAGTAACACAATAAATGTTGTTGATGTGATAATAAAACACATAATGAAACGTTATGAAGCATTAGGATTGAATCCACCTGAATTCTCTGCTTTCTTCTCTGACCTTCCAAGTAATGACTTTAATACCCTTTTTCAACTCCTTCCTCCATTGGCCAATTATGGTGTTAGTATGGAAGAGTGTCTTGCTGCTGATAACCACCGTTCTTACTTCGCCGCCGGTGTCCCCGGCTCTTTCTACCGGAGACTTTTTCCGGCTAGGTCCGTTGATGTTTTTCACTCAGCATTTTCTTTGCATTGGTTGTCTCAGGTACCAGAATCTGTAGAGGAAAAGAGATCAATTGCATACAACAAAGGAAGGGTATTTATCCATGGTGCAAGTGACATAACTGCAAATGCATACAAGAAACAATTCCAAACTGACTTGGCAGGGTTCCTTAGCTCAAGGTCAGTAGAGATGAAAAGTAAAGGGTCAATCATGTTCTTGGTTTGTTTAGGCAGAACTTCTGTGGACCCCACAGACCAAGGTGGGGCTGGTCTCCTCTTTGGGACCCATTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGCTTAATTAGCAATGAAAAAAGAGACAGTTTCAACATTCCAGTGTATGCACCAAGCCTACAAGACTTCAAGGAAGTTGTTGAAGCTGATGGTTCATTTTCAATAAACAAACTTGAAGTTTTCAAAGGAGGAAGCCCTCTTGTTGTGAACCAACCAGATGATGCAAGTGAAGTAGGAAAGGCTTTAGCCAACAGTTGTAGAAGTGTGTCTGGTGTTCTTGTTGATGCTCATATTGGTGATAAGCTTAGTGAAGAACTTTTTCTTAGAGTGGAAAAAAGAGCCACAAATCATGGAAAAGAGTTGTTGGAGAAGCTTCAATTCTTTCACATTGTTGCATCGCTTTCTTTAGTTCAATGA 1158 0.4093 MGDNVVVSSNMELERLLSMKGGKGEASYANNSQAQAIHAKSMFHLLKEALDGIEVDAPKIPFVVVDLGCSCGSNTINVVDVIIKHIMKRYEALGLNPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAADNHRSYFAAGVPGSFYRRLFPARSVDVFHSAFSLHWLSQVPESVEEKRSIAYNKGRVFIHGASDITANAYKKQFQTDLAGFLSSRSVEMKSKGSIMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISNEKRDSFNIPVYAPSLQDFKEVVEADGSFSINKLEVFKGGSPLVVNQPDDASEVGKALANSCRSVSGVLVDAHIGDKLSEELFLRVEKRATNHGKELLEKLQFFHIVASLSLVQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01055 385 Gene3D - 17 364 IPR042086 -
Car05g01055 385 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 9 383 - -
Car05g01055 385 Gene3D Vaccinia Virus protein VP39 31 311 IPR029063 -
Car05g01055 385 Pfam SAM dependent carboxyl methyltransferase 61 382 IPR005299 GO:0008168
Car05g01055 385 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 9 383 IPR005299 GO:0008168
Car05g01055 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 382 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01055 Car-Chr5 52027484 52033061 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01055 K18848 - gmx:100801476 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01055 05 52027484 52033061 Car05g01055 05 52027484 52033061 ECH