Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01053 ATGTCCATCTATAGGGTACTTTCCCGAGCCTCCAGAAGCTTCACGCTTCTCTCTGCTTCGCACAAGCCACAACCTCTTTCCGTTTCTCTCTTCCATCATTTCAGTTCCTTTCCTCATCAATCACCTAATAAGATTATTCCAATTCAAGCCAATTTGTTTCATCCATCAATAAGTTCATCCTTGATTCCAAGGTTTGGATTTTCTTCCTCGGCCTCACCTGAACATGCAAGTGACGGCCCTGCAAAAACAAGCGAAGAAGCTAAGGTAGTTGATAAGAATGAAAAAGATAAAGGTGAAGATCAAACCAGTGAATCAGATTCAGATGTAGAGAGTGAATGTGATCTATCTAGAGATGAATTAGTAAATCTTGTTTCCGAGAAGGAAGAACTTTTGAAGTTGAAGCAAAAAGAGATCGAGAAAATGCAGGATAAAGTTTTGCGTACTTTAGCAGAGATGGAGAATGTCATGGACAGGACAAAACGCAATGCAGAGAATTCAAAGAAATTTGCTATACAGAATTTTGCCAAGAGTTTACTAGATGTCGCAGACAATTTGGGAAGAGCTTCTTCAGTTGTAAAGGAGAGTTTTTCAAAAATTGAATCTCCTAAAGACTCTGATGAAGCCGCAAAACTCCTGAAAACACTTCTGGAAGGTGTTGAAATGACTGAGAAACAACTTGCAGAGGTACTTAAAAAGCATGGTTTAGAAAAATTTGATCCTACAAATGAACCATTTGATCCAAACAGGCATAATGCCATCTTCCAAATACCTGATGCTTCCAAGCCTCCAGGCACTGTTGGAGTTGTTCTCAAGGCAGGATATATGCTTTATGATCGTGTAATTCGTCCAGCAGAAGTTGGGGTAACACACGAAGTGGAGGATAACAAGACAGATGAATGA 900 0.3978 MSIYRVLSRASRSFTLLSASHKPQPLSVSLFHHFSSFPHQSPNKIIPIQANLFHPSISSSLIPRFGFSSSASPEHASDGPAKTSEEAKVVDKNEKDKGEDQTSESDSDVESECDLSRDELVNLVSEKEELLKLKQKEIEKMQDKVLRTLAEMENVMDRTKRNAENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIESPKDSDEAAKLLKTLLEGVEMTEKQLAEVLKKHGLEKFDPTNEPFDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRVIRPAEVGVTHEVEDNKTDE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01053 299 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 235 289 IPR009012 GO:0006457
Car05g01053 299 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 125 234 IPR013805 -
Car05g01053 299 MobiDBLite consensus disorder prediction 79 104 - -
Car05g01053 299 Gene3D Head domain of nucleotide exchange factor GrpE 234 289 IPR009012 GO:0006457
Car05g01053 299 CDD GrpE 139 288 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Car05g01053 299 Hamap Protein GrpE [grpE]. 77 290 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Car05g01053 299 PRINTS GrpE protein signature 146 162 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Car05g01053 299 PRINTS GrpE protein signature 242 257 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Car05g01053 299 PRINTS GrpE protein signature 269 288 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Car05g01053 299 PANTHER GRPE PROTEIN HOMOLOG 6 292 - -
Car05g01053 299 MobiDBLite consensus disorder prediction 69 114 - -
Car05g01053 299 Pfam GrpE 125 289 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Car05g01053 299 ProSitePatterns grpE protein signature. 245 288 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Car05g01053 299 MobiDBLite consensus disorder prediction 238 258 - -
Car05g01053 299 Coils Coil 117 162 - -
Car05g01053 299 PANTHER GRPE PROTEIN 6 292 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Car05g01053 299 Gene3D - 122 233 IPR013805 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01053 K03687 - gmx:100812682 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01053 05 52007615 52011787 Car05g01053 05 52007615 52011787 ECH