Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01051 ATGGAGATTGATTCAATCGCTTTTGATTCATGCTCGAAAGAGAATTTGACCCTTTATCAAGAGTGGTTCAATTATGCAGATTCAGATGGTGATGGTCGCTTTACAGGGAATGAAGCCACTAAATTTTTCGCCATGTCGCACTTGTCTCGCCAAGAGCTTAAGCAGGTGTGGGCTATTGCAGATTCAAAGCGAGAAGGATATCTCGGTTTCAAAGAATTTGTCATTTCTATGCAGCTTGTTTCTTTAGGACAATCTGGCCACTCAATAACACATGATCTTCTCACTACTGATATTTTGCAAAATATAAAACCACCTCAAATGGAAGGTTTGGATGCATTAGTTGCAAAGAAAAAGCGAAAACAAAAAGATAAAGATGTAAATGCTAGTCCTAGTCCTCTGCCATCGCCTTCGAGTAATTGGTTTTCTGCAAAGTCAACGAAAAAGGTACCGGCTTCCTCAGTGACATCAATTATTGACGGTTTGAAGAGACTTTACATACAGAAGTTGAAGCCTTTAGAAGTTGCTTACCGATACAACGATTTCGTATCTCCTTTATTGAATAATAGTGATTTTGATGCCAAACCTATGGTTATGCTTTTGGGTCAGTACTCAACAGGGAAAACAACTTTTATTAAACATATGCTTCAAAGTAGTTATCCAGGCGCTCATATTGGACCTGAACCAACAACTGATAGGTTTGTTGTTGTCATGTCTGGACCGGATGAAAGAAGTATTCCTGGTAATACTGTTGCTGTACAAGCTGACATGCCATTTGGTGGTCTTACAACTTTTGGCACAGCTTTTTTGTCCAAATTTGAGTGTTCTCAAATGCCTCATCCTCTACTGGAGCACATTACATTTGTGGACAGTCCCGGAGTTCTATCAGGAGAAAAGCAACGATCACAAAGATCATATGATTTCACCGGTGTAACATCTTGGTTTGCTGCTAAATCTGATTTAATACTCCTTCTGTTTGATCCTCACAAACTTGATATCAGCGATGAGTTCAAACGTGTGATATCGTCTCTACGAGGGCATGATGATAAAATTCGGGTGGTTTTGAACAAGTCAGACCAAGTTGATACTCAACAATTAATGAGAATTTATGGTGCATTAATGTGGTCCCTTGGGAAGGTGCTCAATATTCCAGAAGTCATGCGAGTGTATATAGGCTCCTTCAATGACAAGCCTGTAAACGATAGAGCCAATGGTCTACTTGGCAATGAACTCTTTGAAAGAGAACAGGATGACCTTCTTTCAGATTTAAAAGATATACCAAAGAAGGCTTGTGATCGTAAAATCAATGAATTCGTAAAACGAGCTCGAGCCGCAAAGATACATGCATATATTATCAGTCATCTAAAAAAGCAGATGCCTACCATGATGGGGAAAGCTAAAGCTCAACAAAAACTCATTGATAACTTGGAGGGTGAATTTGCAAAGGTACAAAGGGAGTACCATCTACCTCCTGGTGACTTTCCAAATGTTGATCATTTCAAAGAGGTCTTGAGTGGTTATAACATCGACAAGTTCGAGAAATTGAAACCGAAAGCGATACAAGCTGTGGATGACATGCTTGCTCATGATATTCCTAACCTCTTAAAGTCTTTTAGAAATCCATATGGTTAA 1629 0.3923 MEIDSIAFDSCSKENLTLYQEWFNYADSDGDGRFTGNEATKFFAMSHLSRQELKQVWAIADSKREGYLGFKEFVISMQLVSLGQSGHSITHDLLTTDILQNIKPPQMEGLDALVAKKKRKQKDKDVNASPSPLPSPSSNWFSAKSTKKVPASSVTSIIDGLKRLYIQKLKPLEVAYRYNDFVSPLLNNSDFDAKPMVMLLGQYSTGKTTFIKHMLQSSYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFGGLTTFGTAFLSKFECSQMPHPLLEHITFVDSPGVLSGEKQRSQRSYDFTGVTSWFAAKSDLILLLFDPHKLDISDEFKRVISSLRGHDDKIRVVLNKSDQVDTQQLMRIYGALMWSLGKVLNIPEVMRVYIGSFNDKPVNDRANGLLGNELFEREQDDLLSDLKDIPKKACDRKINEFVKRARAAKIHAYIISHLKKQMPTMMGKAKAQQKLIDNLEGEFAKVQREYHLPPGDFPNVDHFKEVLSGYNIDKFEKLKPKAIQAVDDMLAHDIPNLLKSFRNPYG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01051 542 Gene3D - 11 108 - -
Car05g01051 542 SUPERFAMILY EF-hand 12 86 IPR011992 -
Car05g01051 542 Pfam Cytoskeletal-regulatory complex EF hand 19 80 IPR000261 GO:0005515
Car05g01051 542 Pfam N-terminal EH-domain containing protein 160 192 IPR031692 -
Car05g01051 542 SMART eh_3 8 103 IPR000261 GO:0005515
Car05g01051 542 Pfam Dynamin family 197 356 IPR045063 -
Car05g01051 542 Coils Coil 465 485 - -
Car05g01051 542 Gene3D - 197 425 IPR027417 -
Car05g01051 542 ProSiteProfiles EH domain profile. 15 105 IPR000261 GO:0005515
Car05g01051 542 Pfam Domain of unknown function (DUF5600) 432 533 IPR040990 -
Car05g01051 542 MobiDBLite consensus disorder prediction 128 143 - -
Car05g01051 542 CDD EH 19 85 IPR000261 GO:0005515
Car05g01051 542 MobiDBLite consensus disorder prediction 119 143 - -
Car05g01051 542 PANTHER EH DOMAIN 19 540 - -
Car05g01051 542 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 464 IPR027417 -
Car05g01051 542 CDD EHD 196 440 - -
Car05g01051 542 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 191 427 IPR030381 GO:0005525
Car05g01051 542 PANTHER CALCIUM-BINDING EF HAND PROTEIN 19 540 - -
Car05g01051 542 Gene3D - 161 533 - -
Car05g01051 542 ProSiteProfiles EF-hand calcium-binding domain profile. 48 83 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01051 Car-Chr5 51967971 51973804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01051 1 541 EF-hand Containing Proteins AT3G20290 80.331 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01051 K12483 - gmx:100816958 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01051 05 51967971 51973804 Car05g01051 05 51967971 51973804 ECH