Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01050 ATGATGGACACCACCACAATCAAATTCGCAGAAGAATCACTATTACAACCCACCACCACCAACAACAAAAACAAAGGCAAATTTAACCGTAGCGTTTCGCACGTAAACGACGAGCTTCACAGTTTCCGATCTTACCTCCGATGGATGTGCGTTGACCAATCAAACGCCTTCACCGCCACCCTCTCATGGTTCGTTTTCCTCCTTTTCGCGGTGGTGGTTCCTGCTTTGTCGCACTTTTTTCTGGCGTGTTCTGATTGTGATGCTCGTCACTCTCGCCCGTACGACGCTGTCGTTCAGCTTTCTCTGAGTTCCATTGCTGCGTTGTCGTTTTTGTGTTTATCGTCGTTTGTTAGGAAGTATGGTTTGAAGAGGTTCTTGTTCTTTGATAAGCTTTGTGATGAGAGCGAGACCGTTAGAAGAAACTATATGGCGCAGCTCAATAGATCTCTAAAGCTCCTCTCGGTATTTGCGGGTCCATGCTTCGTTGCAATGGTCGCATACAAGATCTGGTGGTACGCATCAGGAGGATCACAAATCCCATTCTTAGGCAACGTCTACGTTAGTGATGCGGTAGCGTGCATATTAGAACTGTGCTCGTGGCTGTACCGTACCACTGTGATATTCCTAGTGTGCGTTCTCTTCCGTTTGATCTGTCACCTTCAGATCCTACGGCTAAAAGACTTTGCCACGTATTTTCATGTGGACTCAGATGTGCAATCCGTATTGTCGGAACACCTAAGGATTAGGAGGCATCTACGAATCATAAGCCATAGATTTCGCGCGTTTATTCTACTTGCGCTTGTATTGGTCACGGGAAGCTTGTTTGTTTGTCTCCTCGTTACGACTAAGGCTAGACATGATCTCAACATCTACAAAACCGGTGAACTTGCGCTGTGTTCTGTTACACTCCTTTCTGCACTGTCCATCATGTTCCGAAGTGCCACAAAGATAACACACAAAGCACAAGCGATCACAGGGCTAGCTGCCAAGTGGCATGTCTGTGCAACGTTGGATTCTTTTGATGGAGTAGCCCAAGGTGACACACTAACGGCTCAGATTTCGCATGATAGAATCTATCCTACGGTGGGAACAGATGGAGAATCAGAGACtgatgatgctggtgatgaagaagatgatATTAATAACACTAAGTTAATTCCATCCTATGCTTATAGCACCATCTCATATCAGAAAAGACAAGCTCTTGTAAATTACTTTGAGAACAATAAGGCAGGAATTACCGTATATGGATTCATGTTGGATAGGAGTACGCTTCACACCATATTTGGTATTGAGCTATCTCTAGTTCTTTGGCTGCTTGGAAAAACTATAGGCATTTCTTGA 1344 0.4397 MMDTTTIKFAEESLLQPTTTNNKNKGKFNRSVSHVNDELHSFRSYLRWMCVDQSNAFTATLSWFVFLLFAVVVPALSHFFLACSDCDARHSRPYDAVVQLSLSSIAALSFLCLSSFVRKYGLKRFLFFDKLCDESETVRRNYMAQLNRSLKLLSVFAGPCFVAMVAYKIWWYASGGSQIPFLGNVYVSDAVACILELCSWLYRTTVIFLVCVLFRLICHLQILRLKDFATYFHVDSDVQSVLSEHLRIRRHLRIISHRFRAFILLALVLVTGSLFVCLLVTTKARHDLNIYKTGELALCSVTLLSALSIMFRSATKITHKAQAITGLAAKWHVCATLDSFDGVAQGDTLTAQISHDRIYPTVGTDGESETDDAGDEEDDINNTKLIPSYAYSTISYQKRQALVNYFENNKAGITVYGFMLDRSTLHTIFGIELSLVLWLLGKTIGIS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01050 447 MobiDBLite consensus disorder prediction 360 380 - -
Car05g01050 447 PANTHER EXTRACELLULAR LIGAND-GATED ION CHANNEL PROTEIN (DUF3537) 19 447 - -
Car05g01050 447 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 19 447 IPR021924 -
Car05g01050 447 Pfam Protein of unknown function (DUF3537) 37 431 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01050 Car-Chr5 51891722 51896399 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01050 - - gmx:100806904 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01050 05 51891722 51896399 Car05g01050 05 51891722 51896399 ECH