Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01032 ATGAACAAGTTTAAGAAATCTCAAGTTCTAATTTTTTTCATTCTACTTCTTTTTCTTTCCTTTACACCTTTATTACCTTCCTCTCTTAAACCTACCTACTTGTATTTCATCTCAAACTTCATCATCATTACACTTGGTGCTGAAGCTGGTCTTCTTTCAACTCTTTCCAAACCTTTAGAAGACAAAACACAATCTTTTTCTGTTAACAGAAAACCCCAAGAAGCCATTTCTGAGAAAAAAGAAGCTTCCACCACTTCAAGTTTAAGTGCTGTCTCAGAAGATGTTGAAAAATCAGAATCTGAGAGAGTTGTTTCTGTCACCAAAGTGGTTAAGGTGCAAAAGGGTTCTTCAAAACCTAGTATTTTCTTCTTGGAGAATGAAGAGAATGATGAAGGAATGATAGATGATGAAATTGAAGTAGAAGAAGAGATTGAAGGACTTAATGGTCAAGAATTGTCTGCAAAAGCTGAAGTTTTCATTAGGAACTTCTACAAACAATTGAAGGTGCAGAAAGAGAGGAATCTTGGATTTACCATAAAGCCTTCTAATCTACAAACAACCACATGGACACAATAA 576 0.3472 MNKFKKSQVLIFFILLLFLSFTPLLPSSLKPTYLYFISNFIIITLGAEAGLLSTLSKPLEDKTQSFSVNRKPQEAISEKKEASTTSSLSAVSEDVEKSESERVVSVTKVVKVQKGSSKPSIFFLENEENDEGMIDDEIEVEEEIEGLNGQELSAKAEVFIRNFYKQLKVQKERNLGFTIKPSNLQTTTWTQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01032 191 Pfam Domain of unknown function (DUF4408) 28 48 IPR025520 -
Car05g01032 191 Pfam Cotton fibre expressed protein 150 172 IPR008480 -
Car05g01032 191 PANTHER OS01G0532300 PROTEIN 1 173 - -
Car05g01032 191 PANTHER OS01G0532300 PROTEIN 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01032 Car-Chr5 51336847 51337661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01032 - - mtr:MTR_3g053160 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01032 05 51336847 51337661 Car05g01032 05 51336847 51337661 ECH
Car05g01032 05 51336847 51337661 Car02g02066 02 51091145 51091931 PCT