Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01010 ATGGATTCCATAGTTATGATGAGGAATTCCTTTTTATTTATCACTTTTTTTATATTCAACTTAGGATTCTTAGATGCTCAAAAGACTCCAGCTATTTATGTGTTTGGAGACTCACTTGTTGATGTTGGAAACAATAATTACTTGACTCTTTCTCTTGTAAAGGCAACTCTACCTCACTATGGCATTGATTTTCCAACTAAGAGACCAACTGGGAGGTTTAGTAATGGCAAAAATGCTGCTGATTTGATTGCTGAAAAAGTAGGCCTGCCCACTTCACCACCTTACCTCTCTCTAATATGTAAGGTTAAAAACAACAACAACAAGAATGTATCCTTTTTGAGTGGTGTTAACTTTGCCTCTGGAGGTGCTGGAATATTCAATGGCACCGATGATAATTTTAGGCAATCAATACCTTTGACAAAGCAAGTGGACTACTATTCACAAGTGCATGATCAATTGACACAACAAATAGGAGCATCTACCCTTCAAAAACACCTCTCAAAATCTATTTTCATTGTTGTGATTGGAAGCAATGATATCTTTGGTTACTCTAACTCAATGGATCTTCAAAAGAAAAACACTCCACAACAATATGTGGATTCCATGACTTCCTCACTAAAAATACAACTACAGAGATTATACAACATTGGTGCAAGGAAATTTGAGATTGTTGGTGTTAGTGCAATTGGATGCAGCCCTGCATATAGGCTCAAGAACAAAACAGAATGCTTTTTAGAAGCCAATTTATTGTCAATTAAGTATAATGAAGAGCTTCAATCCATGTTGAAGGAATGGAAATTGGAGAATAAGGACTCAAGTTACTCATACTTTGATACTTATGCTGCACTCCAAGACCTCATTCATAATCCAACTTCTTATGGATTTGTAGATGTGAAAGATGCATGTTGTGGACTTGGTGAGCTGAATTCTCAGTTTCTATGTACACCAATTTCAATTCTTTGCTCCAATAGAAAAGACCATATCTTTTGGGATCAAGTCCATCCTACTGAAGCAGCTACTCGCATAATTGTGGATACACTTTTTAATGGACCTTCAAAATATACATTTCCTATTAATATGGAACAACTACTAGCTCTTTGA 1101 0.3588 MDSIVMMRNSFLFITFFIFNLGFLDAQKTPAIYVFGDSLVDVGNNNYLTLSLVKATLPHYGIDFPTKRPTGRFSNGKNAADLIAEKVGLPTSPPYLSLICKVKNNNNKNVSFLSGVNFASGGAGIFNGTDDNFRQSIPLTKQVDYYSQVHDQLTQQIGASTLQKHLSKSIFIVVIGSNDIFGYSNSMDLQKKNTPQQYVDSMTSSLKIQLQRLYNIGARKFEIVGVSAIGCSPAYRLKNKTECFLEANLLSIKYNEELQSMLKEWKLENKDSSYSYFDTYAALQDLIHNPTSYGFVDVKDACCGLGELNSQFLCTPISILCSNRKDHIFWDQVHPTEAATRIIVDTLFNGPSKYTFPINMEQLLAL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01010 366 Gene3D SGNH hydrolase 23 352 IPR036514 -
Car05g01010 366 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 6 364 - -
Car05g01010 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 364 - -
Car05g01010 366 CDD SGNH_plant_lipase_like 30 351 IPR035669 -
Car05g01010 366 Pfam GDSL-like Lipase/Acylhydrolase 32 345 IPR001087 GO:0016788
Car05g01010 366 SUPERFAMILY SGNH hydrolase 29 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01010 Car-Chr5 50837049 50841263 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01010 29 364 Acyl Lipid Metabolism Gene Families AT4G10950 33.918 3.76e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01010 - - gmx:100790145 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01010 05 50837049 50841263 Car05g01010 05 50837049 50841263 ECH
Car05g01010 05 50837049 50841263 Car02g02050 02 50949593 50953021 PCT