Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00969 ATGGGTTACAGAAACAAGAATTTGGTGACTGAGAAGAATCACActttttcttcttcatcttcttcAAATTGTGAATCACTGAGTGAAGCTATGCTCTTAACCACCATGAGTATCATTGGTTTACCAGTTGATGTTCATGTTAAAGATGGTTCCGTATATTCTGGAATCTTCTATACTGCTTCTGTTGATGCGGATTACGGTATTGTTTTGAAGCAAGCGAGGATGACAAAGAAGGGAAAAGGCCACAGCAATGTTGGAAAGGATGCCTTGGTAGATACATTAGTGGTTCTATCAGATGATCTTGTGCAAGTTGTTGCTAAGGGAGTAACGCTTCCTGCAGATGGTGTTGGTGGAAATATAACTGGTGATGAAGAGGAAGCAGTTACACACAAGGTTTGTTGTTCTGAGAGGCGTCCGATGAATGCAAAACAGGTTAATCAATCAAGACAAGCTGAAGATAACAACTCGAAAAGGAAACCCGATGACTGCAGGCAGAAGTTTGAATTCAATAACGAAAAAAATGATGAAAAGATTCAAAGCCTTGATTCGCACCATGAAGTTGATACATGTCTTGGCCAAGTTGAACCTGTTGAACGTGGAAGCGCTAAAATGACACCGAGTCCTTCTGATGATGGTTTATTCTGCAATAATGCATCTGCACCTGACAAAGCCAATGACCAAGGTAGTGAAAGGTCTACTTCAGCAGATTCTACTTCTACCCGTTCCACCCTAAGTGAAGAACTCAACGAAGCATCACAAAGTTTTCCAGCGAAATCTATTGAAAAAACTGCTCCTAGGGTTACAGATCGTACCAGAAATGCGAAGGAATTTAAGCTCAACCCAGCTGCCAAAATTTTCTCGCCCTCTTTTACATATCCTATATCAGCAACTTCTGCTGTACCAACAGCTGCAAACATGGTTTACATACCAAATAGCTCTCCTCCGCTACCTGTTCAACCAGAAGTTGGATTCAATACTTTTGCTTCTCGGCCCACTGTGCCTGTTAAGGTTTCACAGTATGGTAATATGACAGTTGGAAATGCTGGCAGCGGTTCTCAATTCTCACAACCTATTGTTGGCCAATTGGCACATAGGACACAACCTCTTCAGTATGCTGCACATTACACTCCAGTTTTATCTGAACCTGCTTATATGCAACCAAACTCTCCTGCTGTTATGGTTGGACGATCCACCCAATTAGTCTACGTTCAGCCGGTTTCCCACGAATTCGTTCACGGTGTAACGGCTCCATTCTCAACTCGCCCCCTGTTGAATCATGTGCAATTTCCAAAGCATCAAGGAGGAACAATTAATCAAGGAATTCCGGTTTGTATGCCCCCAACAGTCATAACAACCGTGCAACAACAACCCTTTGCTATTCAAAGCCACATTCCAGTTTTGCAACCTGGCTTTTCTGTACCTAGACCTATTTCAGTCCCAGGACCAAATGGTTTCTACGGCACTAAGTTTTCATGA 1476 0.4201 MGYRNKNLVTEKNHTFSSSSSSNCESLSEAMLLTTMSIIGLPVDVHVKDGSVYSGIFYTASVDADYGIVLKQARMTKKGKGHSNVGKDALVDTLVVLSDDLVQVVAKGVTLPADGVGGNITGDEEEAVTHKVCCSERRPMNAKQVNQSRQAEDNNSKRKPDDCRQKFEFNNEKNDEKIQSLDSHHEVDTCLGQVEPVERGSAKMTPSPSDDGLFCNNASAPDKANDQGSERSTSADSTSTRSTLSEELNEASQSFPAKSIEKTAPRVTDRTRNAKEFKLNPAAKIFSPSFTYPISATSAVPTAANMVYIPNSSPPLPVQPEVGFNTFASRPTVPVKVSQYGNMTVGNAGSGSQFSQPIVGQLAHRTQPLQYAAHYTPVLSEPAYMQPNSPAVMVGRSTQLVYVQPVSHEFVHGVTAPFSTRPLLNHVQFPKHQGGTINQGIPVCMPPTVITTVQQQPFAIQSHIPVLQPGFSVPRPISVPGPNGFYGTKFS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00969 491 MobiDBLite consensus disorder prediction 195 274 - -
Car05g00969 491 MobiDBLite consensus disorder prediction 134 164 - -
Car05g00969 491 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 1 488 - -
Car05g00969 491 Pfam Ataxin 2 SM domain 29 107 IPR025852 -
Car05g00969 491 PANTHER ATAXIN 2-RELATED 1 488 IPR045117 GO:0003723
Car05g00969 491 MobiDBLite consensus disorder prediction 210 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00969 Car-Chr5 50215444 50223119 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00969 - - gmx:100809285 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00969 05 50215444 50223119 Car05g00969 05 50215444 50223119 ECH