Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00968 ATGAAAGAACTCAAACTCATTCTAACAGTTTTATTGCTTCTGTCAGTAACCACCATTGCTGATGATTATGTTCGACCTCAGCCTCGAAAAACCTTACATCTTCCATGGCATTCAAAATCCTCTTCTTATCCTCAGCAGGTTCACATTTCTTTTGCTGGAGACAAGCACATGAGAGTTACATGGATTACTGATGACACATCTGCACCTTCAGTTGTTGAATATGGAACATTGCCAGGGAAATATGGTTCTGTAGCTGAAGGAGAGACAACCTCTTATAGTTACCTGTTCTATAGCTCAGGAAAGATACACCATACTGTAATTGGCCCTTTAGAGCCAAATTCTGTCTACTTTTACCGTTGTGGTGGAGAAGGTCCTGAGTTTGAGCTCAAAACACCTCCATCTCAGTTTCCAATCACTTTTGCTGTGGCGGGAGATCTTGGCCAAACTGGTTGGACTAAATCGACATTAGATCACATCGACCGATGCAAATATGATGTTAACTTGATTCCCGGAGACCTTTCGTATGCGGATTATATTCAGCATCGTTGGGACTCATTTGGTAGACTTGTGCAGCCACTTGCTAGTGCTAGACCATGGATGGTAACACAAGGGAATCATGAAGTGGAACACATACCCTTGATAAAAGATGGATTTATATCCTATAATTCTAGATGGAAAATGCCGTTTGAGGAGAGTGGTTCAAGTTCGAATCTTTATTATTCTTTTGAAGTTGCTGGTGCTCACATTATCATGCTTGGCTCGTATGCTGATTATGACGAGTACTCAGAACAATATACATGGCTGAAGACAGATTTGTCAAAGGTGGACAGGAAAAGGACACCATGGTTACTTGTCTTATTTCATGTTCCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGTGGTGATATGATGCAAACCATGGAGCCATTGCTTTATGCTGCTAACGTTGATTTAGTTTTTGCCGGTCATGTGCACGCCTACGAACGCTCAAAACGTGTATATAATGGAAGATTGGATCCTTGTGGTGCTGTCCATATAACAATTGGTGATGGAGGGAACAAAGAAGGCTTAGCACATAAGTATATTACTCCACAGCCAAAGTGGTCAGACTTCCGTGAAGCAAGTTTCGGTCACGGTGAGCTAAAGATTGTAAACTCCACGCATGCCTTTTGGAGTTGGCACCGGAATGACGACGATGAGCCAGTAAAATCTGATGATATCTGGATAAACTCTTTAGTCAGCTCAGGATGTGTTGATCAGAAGAGAACTGAAATCCCTTGA 1287 0.4188 MKELKLILTVLLLLSVTTIADDYVRPQPRKTLHLPWHSKSSSYPQQVHISFAGDKHMRVTWITDDTSAPSVVEYGTLPGKYGSVAEGETTSYSYLFYSSGKIHHTVIGPLEPNSVYFYRCGGEGPEFELKTPPSQFPITFAVAGDLGQTGWTKSTLDHIDRCKYDVNLIPGDLSYADYIQHRWDSFGRLVQPLASARPWMVTQGNHEVEHIPLIKDGFISYNSRWKMPFEESGSSSNLYYSFEVAGAHIIMLGSYADYDEYSEQYTWLKTDLSKVDRKRTPWLLVLFHVPWYNSNTAHQGEGGDMMQTMEPLLYAANVDLVFAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNKEGLAHKYITPQPKWSDFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWINSLVSSGCVDQKRTEIP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00968 428 PANTHER ACID PHOSPHATASE RELATED 6 423 IPR039331 GO:0003993
Car05g00968 428 PANTHER PURPLE ACID PHOSPHATASE 18 6 423 - -
Car05g00968 428 Gene3D - 135 421 IPR029052 -
Car05g00968 428 Pfam Purple acid Phosphatase, N-terminal domain 44 124 IPR015914 GO:0003993|GO:0046872
Car05g00968 428 Pfam Calcineurin-like phosphoesterase 139 329 IPR004843 GO:0016787
Car05g00968 428 Pfam Iron/zinc purple acid phosphatase-like protein C 345 401 IPR025733 -
Car05g00968 428 CDD MPP_PAPs 134 413 IPR041792 -
Car05g00968 428 SUPERFAMILY Purple acid phosphatase, N-terminal domain 31 133 IPR008963 GO:0003993|GO:0046872
Car05g00968 428 Gene3D - 43 134 - -
Car05g00968 428 SUPERFAMILY Metallo-dependent phosphatases 137 404 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00968 Car-Chr5 50199454 50203661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00968 44 428 Miscellaneous Gene Families AT1G13900 25.983 5.36e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00968 K22390 - gmx:100782338 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00968 05 50199454 50203661 Car05g00968 05 50199454 50203661 ECH
Car05g00968 05 50199454 50203661 Car02g02032 02 50777027 50781990 PCT