Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00966 ATGAGAAGGAGACCAGGAATTGGAGGGTTACAAACAGCTGCTGCTGCAAGGGATCAATATAGGTTATTGGGTGAGAATGTAGCAAAGATCAGAACCGATATGATGAAAGAACAGCTTTCCACTTTTCGTTCTCAGCTTGAAGATTTTGCTCGGAAACACAAGAATGACATCCGCAAGAACCCTGCATTCAGATCACAGTTTCATGAGATGTGTGCGAAAGTTGGAGTAGATCCCTTGGCTTCAAACAAGGGTTTTTGGGCAGAGCTATTGGGGATTGGTGACTTCTATTATGAACTTGGAGTTCAAATAGTGGACATTTGCTTGGCTACTAGACCACTCAATGGTGGATTGATCAACCTGCAGGAACTCTGTAATCTCCTTCGCCAGAGACGAAAAAGTGATCGCGGAGTTGTTTCTGAGGATGATTGCTTGCGTGCTATCAGTAAACTGAAGGTTCTAGGTAGCGGGTTCGAAGTTATTTCTGTTGGAAAGAAAAAACTTGTTCGTTCGGTTCCAACTGAGCTGAACAAAGACCATAATGAAATTCTAGAACTTGCCCAGGGTCAAGGATTTGTGACTGTCAGTGAAGTAGAAAGGAGGCTATCTTGGACTCCTGGCCGTGCTATTGATGCACTTGATACATTACTTGATGAGGGACTTGCAATGATTGATGATGGCCACAAAGATGGGAAACGGCGTTACTGGTTTCCTTGTGTATCCCCCATTTCGTCTTTGACAGGAATTGATTCCTTGTAA 756 0.4365 MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDMMKEQLSTFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPLNGGLINLQELCNLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKKKLVRSVPTELNKDHNEILELAQGQGFVTVSEVERRLSWTPGRAIDALDTLLDEGLAMIDDGHKDGKRRYWFPCVSPISSLTGIDSL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00966 251 Pfam EAP30/Vps36 family 6 225 IPR040608 -
Car05g00966 251 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 241 IPR016689 GO:0000814|GO:0071985
Car05g00966 251 Gene3D - 91 171 IPR036388 -
Car05g00966 251 SUPERFAMILY "Winged helix" DNA-binding domain 175 238 IPR036390 -
Car05g00966 251 PIRSF ESCRT2_Vps22 1 244 IPR016689 GO:0000814|GO:0071985
Car05g00966 251 Gene3D - 24 85 - -
Car05g00966 251 SUPERFAMILY "Winged helix" DNA-binding domain 24 174 IPR036390 -
Car05g00966 251 Gene3D - 172 247 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00966 K12188 - rcu:8282922 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00966 05 50192021 50195404 Car05g00966 05 50192021 50195404 ECH