Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00960 ATGTTGATCAACCATGGAGACCCTTTATTGTTTAGGTGGCATATGGTTAAGGATTTGAATATTGACAATGTTAGGTTGGCATTAGACTTAGCTATGGATGATTTTCTTTGGCGTCCATATGTTAGATATGGCGATAAGTGTGGAATGTTTTATCCAAATGATGAAATTTGGATACCATTTAAGAAAGATTTGGATAAAGAAATATTGTCATTTGTTACATGCTTGAGAGTTTGTGAGCTTGTTGGATTTGGCTCTACAGAGCAATATCTCCCTCATAGAGTTGCTATGCAATTTGGAATGGATCAAGATGTTCCGGCTCACGTGCCTAGATCCAATTGGACCAAAGCCGTTGCTTGGGAAAATTACTGCAGGCCATTTTCTGATAGAAATTTGTACTTTCCTTCTAGATTTTTTGAAGCAGATGTTACCGATCGTTATGCAAAGTGGTGGAAGCAATCTGTATCGGGTTGCGACGATTTTGTTAAGAATATTGTGCGGCGGAAGAGAAGTGCAAGTTCAAGAAAACATAGACCTCATGGAGGAAAAGCTAACAAAAGTGGTAACTTTTTTCTGCAAAGGAAAAGTGGTAATGATCCTGACGTTCCACCTGGATTTCCTCCCAAACTTGTCGACACTCTTACTTTCGGAAAATTTTGTGTTGATGATTCAAAATCTAAAACTAGGAAGGCTGATGATTTTTATGCTAATGTTCACTCTAAAAATTTTGTTCATAATGGTTTGAAAGCTGTTGAAAATATTGATGTTGATGAGGATTGTAAGCCTTTATTGGAAGAGTACAAGTGTGGTTGCACATCAAATCAATGTAAGCATTTATTCAATCAATGTTGTTCAGCCTCTTCAGCAGATTATGTCGATTTCAAAAAGATATTACCAATGAAAAGACCAGTACCTAAAGGGAACAATGAACCTTCAATAGGAGGTTTGGAGAAAATTGTTAAAGATGCAAATGGGAGCAAAGAAGTGACTCAAGATACTATCAGAAACAATGTCTCTTTGTCCGACAAAGTAACTGTTGTGCAGGATGATGTTCGGTTTCGTTCTGATATGGCTGCTCAAGCAGAAGCTAACGAAGCGATTGAagaaagggaaagaaaagaaagagaagaaaaagaTGATGAAGTTGTGGTTTTGTTAAAAGAGAAATACTTGAAGAATCAAGAAGAAATCGAGCGTCTGACAAGACAACAGGAAGAAATCCTGCGGTATATGGATTTGAGGGAGAAGAAGGATGAAGAGTTGAAGCAACTCCTCGCTAGTGTTCTAAAGAATGAACAACCACCATCATGTTCTTAA 1314 0.3668 MLINHGDPLLFRWHMVKDLNIDNVRLALDLAMDDFLWRPYVRYGDKCGMFYPNDEIWIPFKKDLDKEILSFVTCLRVCELVGFGSTEQYLPHRVAMQFGMDQDVPAHVPRSNWTKAVAWENYCRPFSDRNLYFPSRFFEADVTDRYAKWWKQSVSGCDDFVKNIVRRKRSASSRKHRPHGGKANKSGNFFLQRKSGNDPDVPPGFPPKLVDTLTFGKFCVDDSKSKTRKADDFYANVHSKNFVHNGLKAVENIDVDEDCKPLLEEYKCGCTSNQCKHLFNQCCSASSADYVDFKKILPMKRPVPKGNNEPSIGGLEKIVKDANGSKEVTQDTIRNNVSLSDKVTVVQDDVRFRSDMAAQAEANEAIEERERKEREEKDDEVVVLLKEKYLKNQEEIERLTRQQEEILRYMDLREKKDEELKQLLASVLKNEQPPSCS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00960 437 Coils Coil 355 379 - -
Car05g00960 437 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG 2 176 - -
Car05g00960 437 Pfam Plant mobile domain 3 151 IPR019557 -
Car05g00960 437 MobiDBLite consensus disorder prediction 168 193 - -
Car05g00960 437 PANTHER PROTEIN MAIN-LIKE 2 2 176 IPR044824 GO:0010073|GO:0048507
Car05g00960 437 Coils Coil 382 402 - -
Car05g00960 437 MobiDBLite consensus disorder prediction 168 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00960 Car-Chr5 50101645 50102958 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00960 - - cam:101513060 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00960 05 50101645 50102958 Car05g00960 05 50101645 50102958 ECH