Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00954 ATGAAGAACACCAAGCTCCAAACCCAAACCCAACCAACTTCCTCAAGATCTTCATCACTCTCCTCCCACTTAGCAATGGTTGAACTCAAACAAAAAATCTTAACCTCCCTCTCAAAACTCTCCGACAGAGACACACACCAAATCGCCCTAGAAGACCTCGAGAAAACAATCCAAACCCTATCATCCGACGCCATTCCCATGATCCTAAACTGCTTATACGACGCCGTTTCAGACCCTAAACCCCCAATCAAAAACGAATCCCTCCGTCTCCTCTCATTCGTCTGCTCTTCCCACCAACACTCCGCCGCACCTCACCTCACCAAAATCATTTCGCACATCGTCCGCCGTCTTAAAGACGCAGATTCCGCCTCCCGCGACGCATGCCGTGATTCAATTGGATCTCTTTCGGGTCTGTACCTTAGAGGAGAGAACAATGGGAATAGTGGTTCACTTGTTGGGTTGTTTGTGAAGCCATTGTTTGAGGCTATGGGGGATCAGAATAAGGCTGTTCAGGTTGGTGCTGCTGTTTGTATGGCGAAATTGGTTGAGTCGGCTTCTGTTGGGAATGATGGTGATGTCGCTGTGGTGCCGGTGGCGGCGTTTCAGAAGATGTGCCCTAGGATCTGCAAGCTTATTAATAACCCTCATTTCTTTGCTAAGGCTGCTATTTTGCCTGTGGTTGCTGCTTTGTCTCAGGCTGGGGCAATTGCACCACAAAGCTTGGAACATTTGCTACCTAGTATTCATGACTGTCTCTCCAGTAGTGATTGGGCAACACGTAAAGCAGCAGCAGAGGCGTTAAGTTCCCTGGCTTTGCATTCAAGCAGTTTGATTACTGATAAAACAACACCCACACTGGCATTGCTTGAGGCTTGCCGGTTTGACAAGATTAAACCTGTGAGAGATAGCATGACAGAGGCATTGCAATTGTGGAAAAGAATTGCAGATGGTGGGAATCCTGAACCAGCTGTTTTGTCGGAAATAAGTGACCTGAAAAAGGTAAATCCTGATGAGAGGAAGACTGATCCATTAGTAAAGGACACGGATTTGACTTCTAAGGCCAAAGCGACTAGCATCTCAGAGACAGAAAAGGCAGTTGTAATATTAAAAAAGAAAGCACCCGTCTTAAATGATAAAGTACTAAATCCAGAATTTTTCCAAAAACTTGAAAGAAGGGGTTCTGATGATTTACCAGTGGAAGTGGTTGTTCCTCGCAGATGCCTCAATTCTTCTAGCTCAAACAATGAGGAAGAATCAGAGGCAACTGCTAAAGATTCAAACGAAAGAACTAATTCCCTTGGAAATCCCCCTAATGACAATAATAAATATCATGTCTCAGAGAGGGGTATTGATGGAAATTCAAGACAAAGGAATTGTGACGACTTTGCCCATGACAGATACTCTGAAAGGAGAATGAATGCAAAAGAACTGAGGACAAAAGCAAATGATACAAATGAAAGGACTGAAAATGATCAGAGGGAGGGTTCTACCAACCATGCAGGTTTTTCTAGAACTGATGGTCAATCAGAAGTACCCTTCTCCAATAACAGAGGAAACTGGTTGGCAATCCAGAGACAGTTAACACAGCTTGAAAGACAACAGGTTCATCTGATGAACATGCTACAGGATTTCATGGGTGGATCTCATGATAGCATGGTGACTCTTGAGAACAGAGTAAGAGGTCTTGAGAGAATTGTTGAAGACATGTCACGGGATTTATCTATATCATCAGGCCGTAGATTCGACGGATCATCAAGTCGGCCGTCTAGCAAGTATAATGGTTTTAATGATTATTCCAATGCCAAGTATGGAAGAGGTGGTGATGGACGCATCCCATATAATGAAAGATTCACCCAAACTGATGGTAATGCTATGGGGATGAGGGGAAGAGGGCCATCTTGGAGATCTGACATGCCTGAGGGTTGGGATTTTTCTGGTTATGGTGCTTCTAGAAACAGCCAAATTCCCTTGAGGAGAGCTTTTGGTGGTAGTTCTGTTGATGGAAGATCACCAAAATCAATGCATGAGAGTGATCTAGGGGGCAGCAGGAGAGCTTGGGATAGAGCGGCAATGCCTATACGGCTTGGTGAGGGGCCCTCTGCAAGAAGTGTTTGGCAAGCTTCAAAGGACGAAGCTACCTTGGAAGCAATTCGGGTTGCTGGTGAGGACAATGGAACATCTAGAGCAACAAGAGTAGCAATCCCTGAAATGACTGCAGAAGCTCTGGCTGATGACAATGTTGAACAAGAGAGGGATGCAATGTGGGCTTCTCTGTGTAATGCAATGGATGCCTTTCAAGCAGGTGACGTAGATTCGGCCTTTGCAGAAGTGTTGTCTACCGGAGATGATCTTTTGCTTGTGAAGCTAATGGATAGAACTGGCCCTGTAATGGACCAACTTTCAAGTGAGATTGCATGTGAGATCTTGCATTCCATTGGACAATTCTTACGAGAGCAGAACGTGTTGGACATCTGTTTGTCTTGGATTCAACAGTTGGTGGAGGTGTTATTGGACAATGGCCCTGATACTTTTGGCATTCCCATGGAAGTGAAGAAAATGCTCTTGCAAAATTTAGATGAAGCTTCAGATACAGTTGAGGACTGGGAAGGTGTTCCTCCAGATCAACTTTTATTGCAGTTGGCATCAGCCTGGGAAATTGATCTTCAACAGCATGACAAATAG 2682 0.4482 MKNTKLQTQTQPTSSRSSSLSSHLAMVELKQKILTSLSKLSDRDTHQIALEDLEKTIQTLSSDAIPMILNCLYDAVSDPKPPIKNESLRLLSFVCSSHQHSAAPHLTKIISHIVRRLKDADSASRDACRDSIGSLSGLYLRGENNGNSGSLVGLFVKPLFEAMGDQNKAVQVGAAVCMAKLVESASVGNDGDVAVVPVAAFQKMCPRICKLINNPHFFAKAAILPVVAALSQAGAIAPQSLEHLLPSIHDCLSSSDWATRKAAAEALSSLALHSSSLITDKTTPTLALLEACRFDKIKPVRDSMTEALQLWKRIADGGNPEPAVLSEISDLKKVNPDERKTDPLVKDTDLTSKAKATSISETEKAVVILKKKAPVLNDKVLNPEFFQKLERRGSDDLPVEVVVPRRCLNSSSSNNEEESEATAKDSNERTNSLGNPPNDNNKYHVSERGIDGNSRQRNCDDFAHDRYSERRMNAKELRTKANDTNERTENDQREGSTNHAGFSRTDGQSEVPFSNNRGNWLAIQRQLTQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRFDGSSSRPSSKYNGFNDYSNAKYGRGGDGRIPYNERFTQTDGNAMGMRGRGPSWRSDMPEGWDFSGYGASRNSQIPLRRAFGGSSVDGRSPKSMHESDLGGSRRAWDRAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGTSRATRVAIPEMTAEALADDNVEQERDAMWASLCNAMDAFQAGDVDSAFAEVLSTGDDLLLVKLMDRTGPVMDQLSSEIACEILHSIGQFLREQNVLDICLSWIQQLVEVLLDNGPDTFGIPMEVKKMLLQNLDEASDTVEDWEGVPPDQLLLQLASAWEIDLQQHDK 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00954 893 MobiDBLite consensus disorder prediction 426 442 - -
Car05g00954 893 MobiDBLite consensus disorder prediction 655 683 - -
Car05g00954 893 Coils Coil 552 572 - -
Car05g00954 893 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 15 893 - -
Car05g00954 893 MobiDBLite consensus disorder prediction 444 494 - -
Car05g00954 893 Gene3D - 28 144 IPR011989 -
Car05g00954 893 SUPERFAMILY ARM repeat 34 842 IPR016024 -
Car05g00954 893 Coils Coil 43 63 - -
Car05g00954 893 MobiDBLite consensus disorder prediction 495 513 - -
Car05g00954 893 Coils Coil 471 494 - -
Car05g00954 893 Gene3D - 145 299 IPR011989 -
Car05g00954 893 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 15 893 IPR033337 GO:0005874|GO:0008017
Car05g00954 893 MobiDBLite consensus disorder prediction 1 22 - -
Car05g00954 893 MobiDBLite consensus disorder prediction 617 637 - -
Car05g00954 893 MobiDBLite consensus disorder prediction 408 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00954 Car-Chr5 49891013 49897683 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00954 - - gmx:100804845 1339.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00954 05 49891013 49897683 Car05g00954 05 49891013 49897683 ECH