Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00847 ATGATATCCCATTCTCAATTCCTTGCTGTAATTCCAAGAATAATATTTGTTGTTGCAATACAAATAATTGTAGGAGTAAATTCTTTTTCTGAATTTGATAAGATAAAAAGTTTACCTGAACAACCAGAAGTAGAATTCAAACAATATGCTGGTTACATTACGGTTGATGAAGTGCAGCAAAGAGCTTTATATTACTACTTTGTTGAAGCAGAAGTTGATCCAGCTTCAAAGCCGGTAGTTCTTTGGTTGAACGGAGGGCCTGGTTGTTCTTCTATTGGAGTTGGAGCTTTTGTGGAGCATGGTCCTTTCAAACCAGCTAAAAAAGGTCTCATGAAGAATGATTACAGTTGGAACAAAGAGGCAAACATGTTATACTTGGAATCACCTGCTGGTGTTGGTTTCTCCTATTCTGTAAATGAATCATTCTATGACTTAGTGAATGATGAAATGACAGCAAGAGATAATCTTATCTTTCTACAACATTGGTTCACTAAATTCTCCGAGTACAAAAACAATGATTTCTTTCTCACAGGAGAGAGCTACGCAGGTCACTATGTGCCTCAACTTGCACAACTCATTATTCAAACTAAAACCAAGTTCAATCTCAAGGGAATAGCGATAGGGAATCCTCTTATGGAGTTTAACACAGATTTCAACTCTAGAGCTGAGTATTTTTGGTCTCATGGATTAATATCTGACTCAACTTATGAAATCTTCACAAAATCATGTAACTATTCTCAAATAAGAAGACAATATCAAAGTGGCACACTTAGTTCAATTTGTGCAAGAGTAAATAGGCTAGTGTCAATGGAGATCAGTAGATATATTGATCTATATGATGTTACTCTTGATGTTTGTCTACCTTCAGAAAAACAACAGGCATATGTGCTTACTCAATTGCAAGAGGGAGAGAAAATAGATGTTTGTGTGGAAGATGAAACATACATATACTTAAATCGAAAAGAAGTGCAGAAAGCTCTCCATGCTAAACTTGTAGGAATCACCACATGGTTAACTTGTAGTGGAGTTCTGAAATATAACATGAAAAATCTTGAGATTCCAACTATTTCTGTTTTAGGGTCACTTGTTAAGTCAGGTGTTAGAGTTCTAGTATACAGGTGA 1122 0.3556 MISHSQFLAVIPRIIFVVAIQIIVGVNSFSEFDKIKSLPEQPEVEFKQYAGYITVDEVQQRALYYYFVEAEVDPASKPVVLWLNGGPGCSSIGVGAFVEHGPFKPAKKGLMKNDYSWNKEANMLYLESPAGVGFSYSVNESFYDLVNDEMTARDNLIFLQHWFTKFSEYKNNDFFLTGESYAGHYVPQLAQLIIQTKTKFNLKGIAIGNPLMEFNTDFNSRAEYFWSHGLISDSTYEIFTKSCNYSQIRRQYQSGTLSSICARVNRLVSMEISRYIDLYDVTLDVCLPSEKQQAYVLTQLQEGEKIDVCVEDETYIYLNRKEVQKALHAKLVGITTWLTCSGVLKYNMKNLEIPTISVLGSLVKSGVRVLVYR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00847 373 Gene3D - 309 344 - -
Car05g00847 373 PANTHER CARBOXYPEPTIDASE 17 372 - -
Car05g00847 373 SUPERFAMILY alpha/beta-Hydrolases 36 372 IPR029058 -
Car05g00847 373 Pfam Serine carboxypeptidase 42 372 IPR001563 GO:0004185|GO:0006508
Car05g00847 373 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Car05g00847 373 Gene3D alpha/beta hydrolase 30 287 IPR029058 -
Car05g00847 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Car05g00847 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Car05g00847 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Car05g00847 373 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 372 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00847 Car-Chr5 45632032 45636966 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00847 K16297 - gmx:100805028 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00847 05 45632032 45636966 Car05g00847 05 45632032 45636966 ECH