Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00777 ATGGCTAGTAGATCATTTTCTCATTTTGTTGAGGAAGAAATGGGAAAGTTCCCACACTTTGTTATATATATGTTACTTGAATGGGTGTTAATAATCATACTATTCCTTGATGGTTTTTTAGCATTCATTGCCAATGAATTTGCAAGGTTCTTTGAATTGAAAATCCCTTGTTGGTTATGCACAAGGTTTGATCATGTAATGGTTCATAGAAATCCTGATTTTTATTACAATGAGTCTGTTTGTGAGGCTCATAAGAAAGACATGTCATCTCTTGCATTTTGCCACAATCACAAGAAGTTATCTGACATAAGGAAAATGTGTGAAGGGTGTTTACTTTCATTTGCAACAGAGAAGGAATCAGATTGTGATACATATAAGTCACTTGTTGGGATTTTGCATAAAGATTTGGAATGCTTTGTTGAGGATGGACAACCTATTCAGTTGAGTTTGAAGGATGATGATGGTGGGTTCATGGAAGTTTTTGACACAAACAATACTCAGAAATGTTCTTGTTGTGGTAAACCATTGAAAGTCAAGTTTTCTTCTTCTTCCGCCTTTGCAAAAGGGAAACACTCGAGATCATTTGCGCGAGCCCCTACTCCTTCGCCGCGAGCTTTTCCATTTTCAACATCTAAAAATGAGGACCCTCATTCTCTAGAATTGCCTCACATTGCCTATACAGAACTTAAGTTTTTGTCACGGAATGACTCTGAACTACCAGAGGAGGATTTTAACGTCAAATTGACAGAAGACATCAAATCTATCTCTGTGCCTCTATTGGCAGGAGGGGAAGATATAAACGATGAGTCTAGCAAACTAACTCCAACAGTTACAAAAGGCAATAAATTCTTTGGAATTCCATTGTCAGATTCAACAAACAACAGTCCAAGATGGTCGTATAGGTTCAACAAGAAATCACCACTGGAAAAAACAGAATTTGCCTCTGAGTCCAATGAGGTAATTAATGCAACTCAAAATGATTTTGATGATATAATTGTAAACAATTTGAAGAGACAAGTTAGATTGGATCGAAAATCACTAATGGCATTGTACATGGAGTTGGATGAAGAGAGAAGTGCTTCAGCTATTGCTGCTAACAATGCAATGGCAATGATAACAAGGTTGCAAGCAGAGAAAGCAGCGGTGCAAATGGAAGCTTTACAGTATCAAAGAATGATGGAAGAACAAGCTGAGTATGATGAAGAAGCATTGCAGGCAACTAATGACATGCTTCTTAAAAGAGAGGAAGAGATAAGAGCTTTAGAAGCTGAATTGGAGTTTTATAGAAACAAATATGGTTTCTTAATGGCAGAAGGTGATGGCAATAATACTCCATCATTCAGACAAGCTGAAGataataataataataatgagacaactaataaAGATTTGAAAGCAGATAAAACATATCTTATTGGCCGTATGAAGAAGATGGAAAATAGACCATCTTTTTCAGAAAAGGGAACTTTACACTTTCTCTCTGACAATGTCAATAATATAGACAGAGAGACAGAAAAAGGAAGTGGAGTATAG 1533 0.3607 MASRSFSHFVEEEMGKFPHFVIYMLLEWVLIIILFLDGFLAFIANEFARFFELKIPCWLCTRFDHVMVHRNPDFYYNESVCEAHKKDMSSLAFCHNHKKLSDIRKMCEGCLLSFATEKESDCDTYKSLVGILHKDLECFVEDGQPIQLSLKDDDGGFMEVFDTNNTQKCSCCGKPLKVKFSSSSAFAKGKHSRSFARAPTPSPRAFPFSTSKNEDPHSLELPHIAYTELKFLSRNDSELPEEDFNVKLTEDIKSISVPLLAGGEDINDESSKLTPTVTKGNKFFGIPLSDSTNNSPRWSYRFNKKSPLEKTEFASESNEVINATQNDFDDIIVNNLKRQVRLDRKSLMALYMELDEERSASAIAANNAMAMITRLQAEKAAVQMEALQYQRMMEEQAEYDEEALQATNDMLLKREEEIRALEAELEFYRNKYGFLMAEGDGNNTPSFRQAEDNNNNNETTNKDLKADKTYLIGRMKKMENRPSFSEKGTLHFLSDNVNNIDRETEKGSGV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00777 510 PANTHER MYOSIN-BINDING PROTEIN 2 1 502 IPR039306 GO:0017022
Car05g00777 510 PANTHER MYOSIN-BINDING PROTEIN 6-RELATED 1 502 - -
Car05g00777 510 Coils Coil 447 467 - -
Car05g00777 510 ProSiteProfiles GTD-binding domain profile. 331 429 IPR007656 -
Car05g00777 510 MobiDBLite consensus disorder prediction 443 463 - -
Car05g00777 510 Pfam Zein-binding 335 425 IPR007656 -
Car05g00777 510 Coils Coil 365 438 - -
Car05g00777 510 MobiDBLite consensus disorder prediction 443 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00777 Car-Chr5 43253635 43256179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00777 - - mtr:MTR_0168s0060 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00777 05 43253635 43256179 Car05g00777 05 43253635 43256179 ECH