Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00743 ATGGCGACGAAAGGAAACCCTGGAGATAATAGAAATAACAAAGGTCCAATGTCAATTTTCATTGTAGTTGGTTTGTGTGGTTTTTTCTATATATTAGGTTTGTGGCAAAGGAGTGGTTTTGGAAAGGGAGATAGCATTGCTGTTGAGATTACTAAACACACTGATTGTAGTGTTCTCTCTGATCTAAATTACGAAACTCACCATGATAGTGACGCTGGAACGCCTGATGATTTGGATGAACAAGTCAAGGAGTTCAAGCCTTGCGATGATCACTTCATTGATTACACGCCCTGCCATGATCAAGCAAGGGCAATGACGTTTCCGCGAGAGAATATGAATTATAGAGAAAGGCATTGTCCTCCTGATGAAGAGAAATTGCATTGTCTTATAGCTGCACCAAAAGGGTATGCCACACCATTTCCTTGGCCTAAGAGTCGCGACTATGTGCCGTATGCAAACGCGCCTTACAAGAGTTTGACGGTTGAGAAGGCTGTGCAGAATTGGATACAGTATGAAGGGAATGTTTTTAGGTTCCCTGGTGGTGGAACTCAGTTTCCTCAGGGAGCTGATGCTTATATTAATGAACTTGCAGCTGTTATTCCATTAGACAATGGGATGGTTAGAACTGCATTAGATACTGGTTGTGGGGTTGCTAGTTGGGGTGCATACCTGTTTAAGAAAAATGTAATTGCAATGTCAATTGCACCAAGGGACTCTCATGAGGCACAGGTGCAATTTGCTTTGGAAAGAGGTGTTCCTGCAATCATTGGTGTTCTTGGAACAATAATGCTTCCTTTTCCTTCTGGAGCTTTCGACATGGCACATTGTTCTCGCTGCTTGATTCCGTGGGGTGCAAATGGTGGATTGTATATGAAGGAAGTTGACCGAGTTCTTAGACCTGGTGGTTACTGGATACTTTCTGGTCCTCCCATCAATTGGAGGAACAGCTACCGAGCATGGCAACGCCCTGAAGATGAGCTTGAGGAGGAGCAAAAGCAGATTGAAGACACTGCTAAACTTCTTTGCTGGGAAAAGAAACATGAGAAAGGTGAAATCGCGATATGGAGAAAAGCATTAAACAATGATGAATGTGAGCAAGATTCTCAACCTACAATATGTGAATCCACAAATTCTGATGATGTCTGGTACAAGAAGATGGAAAATTGTGTAACGCCTGCTAAACCTAGTGGTTCATGGAAGCCATTCCCAGAGAGACTCAAGGTTGTTCCTTCTAGAATCACCAGCGGATCTGTTCCTGGTGTATCCACAGAGGTATTCCAGGAGGACGTCCGATTATGGAAGAAACATGTGAATGCTTACAAACGTGTCAACAAAATCATTGACTCGGGAAGGTATCGCAATGTGATGGACATGAATGCTGGTCTTGGAAGTTTTGCTGCTGCCATTGATTCTCCCAAATTATGGGTTATGAATGTTGTTCCTACAATTGCCGAGAAAGCTAACCTTGGTGTTATATTCGAGCGAGGATTGATTGGCATTTATCATGATTGGTGTGAAGCCTTCTCCACATATCCAAGGACTTATGACCTTATCCATGCAAATGGTCTTTTCACCTTGTACAAGAATCAGTGCAATGCAGAAGATATCCTATTAGAGATGGACCGTATCTTACGGCCTGAGGGGGCGGTAATATTCCGAGATCAAGTTGGTGTACTAAAGCAAGTGAAAAGAATTGCAAAAGGAATGAGATGGAATACCAAAATGGTGGATCATGAGGATGGTCCACTGATTTCAGAGAAGGTCTTGTATGCTGTCAAGCAGTATTGGGTTGCAGGTAACAACACAACAAGCTCAGAGTGA 1821 0.4294 MATKGNPGDNRNNKGPMSIFIVVGLCGFFYILGLWQRSGFGKGDSIAVEITKHTDCSVLSDLNYETHHDSDAGTPDDLDEQVKEFKPCDDHFIDYTPCHDQARAMTFPRENMNYRERHCPPDEEKLHCLIAAPKGYATPFPWPKSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPQGADAYINELAAVIPLDNGMVRTALDTGCGVASWGAYLFKKNVIAMSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGAFDMAHCSRCLIPWGANGGLYMKEVDRVLRPGGYWILSGPPINWRNSYRAWQRPEDELEEEQKQIEDTAKLLCWEKKHEKGEIAIWRKALNNDECEQDSQPTICESTNSDDVWYKKMENCVTPAKPSGSWKPFPERLKVVPSRITSGSVPGVSTEVFQEDVRLWKKHVNAYKRVNKIIDSGRYRNVMDMNAGLGSFAAAIDSPKLWVMNVVPTIAEKANLGVIFERGLIGIYHDWCEAFSTYPRTYDLIHANGLFTLYKNQCNAEDILLEMDRILRPEGAVIFRDQVGVLKQVKRIAKGMRWNTKMVDHEDGPLISEKVLYAVKQYWVAGNNTTSSE 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00743 606 Gene3D Vaccinia Virus protein VP39 162 361 IPR029063 -
Car05g00743 606 PANTHER METHYLTRANSFERASE PMT18-RELATED 2 602 - -
Car05g00743 606 CDD AdoMet_MTases 209 303 - -
Car05g00743 606 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 2 602 IPR004159 GO:0008168
Car05g00743 606 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 440 563 IPR029063 -
Car05g00743 606 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 593 IPR004159 GO:0008168
Car05g00743 606 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 330 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00743 Car-Chr5 42141277 42146598 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00743 - - gmx:100807547 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00743 05 42141277 42146598 Car05g00743 05 42141277 42146598 ECH