Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00730 ATGCTGCTTCAAGCAATTGGTTCACTCATGGGATTCCACCTTGCATTGTTTCTCTTTTTGGCTTCTCTTCAAGTTACGTTAAGTAAAGATATTTTACATGGTTCACTACTAGTAAATGGAGCTCTAACAAAAGCTGAAACAGGTGATAACTTTATTTGTGCCACTATTGATTGGTGGCCTCATGATAAGTGCGACTACGACCATTGCTCTTGGGGATATTCATCTGTTGCAAATTTGGACTTGTCTCATCCTTTCCTTGCCAAGGCAATCCAAGCCCTCAAACCATTAAGGATAAGACTTGGAGGTTCTTTGCAAGACCAGGTGGTATATGATGTTGGAAGTTTGAAGTATCCTTGTCATCCATTTCAAAAGATGAAAGGTGGATTGTTTGGATTTTCAAAGGGATGTTTACACATGAAAAGGTGGGATGAGCTGAATCATTTATTCAATCAGACAGGGGCCATTGTGACATTTGGTTTGAATGCGCTCCGTGGGAAGCACCAGATTAGTCATAATGTTTGGGAAGGGGCATGGGACCCAACAAATGCTTATGATTTTATAAAGTACACTGTTTCAAAAGGATACAAGATTGACTCGTGGGAACTTGGCAACGAGTTGAGTGGTACGGGTATTGGTGCATGTGTTGGCGTTGTGCAGTATGGGAAAGACTTGATAAACCTTAAACGAATTCTTGATATGTTATACGAGAACTCTAGGTTCAAACCCTCACTTGTAGCACCTGGAGGATTTTATGAAAAGGAATGGTATGATAAGCTTCTTCAGGTTTCCGGTTCAGGCATAATCAATGTTCTGACTCATCATCTATATAATTTGGGCCCAGGCAGTGACAGTCATCTTGAAGGGAAGATTTTAGATCCTGAGCGCTTGAGCAAGGTGGAAACAACTTTCAGCAATCTTGCAGAAACCATTCAAAAACATGGTCCTTGGACTTCTGCATGGGTAGGAGAAGCTGGTGGGGCTTACAACAGTGGCGGTCGTTTTGTTTCCAACACTTTTCTGAATAGCTTTTGGTACTTAGATCAACTTGGAATGGCATCCAGCTACAACACTAAAGTTTATTGCAGGCAGACTTTAATTGGAGGGAACTATGGCCTTCTCAATACCTCCACTTTCACTCCTAATCCTGACTACTACAGTGCACTTTTGTGGCATCGGCTGATGGGAAGGAAGGTTCTTGCAGTTTCGAGTGATATTTCTTCACCTTTTTTACGCACTTATGCCCTTTGTTCAAAAGACAGAGTAAGTATGCTAATTTAG 1278 0.4147 MLLQAIGSLMGFHLALFLFLASLQVTLSKDILHGSLLVNGALTKAETGDNFICATIDWWPHDKCDYDHCSWGYSSVANLDLSHPFLAKAIQALKPLRIRLGGSLQDQVVYDVGSLKYPCHPFQKMKGGLFGFSKGCLHMKRWDELNHLFNQTGAIVTFGLNALRGKHQISHNVWEGAWDPTNAYDFIKYTVSKGYKIDSWELGNELSGTGIGACVGVVQYGKDLINLKRILDMLYENSRFKPSLVAPGGFYEKEWYDKLLQVSGSGIINVLTHHLYNLGPGSDSHLEGKILDPERLSKVETTFSNLAETIQKHGPWTSAWVGEAGGAYNSGGRFVSNTFLNSFWYLDQLGMASSYNTKVYCRQTLIGGNYGLLNTSTFTPNPDYYSALLWHRLMGRKVLAVSSDISSPFLRTYALCSKDRVSMLI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00730 425 Gene3D Glycosidases 68 392 - -
Car05g00730 425 SUPERFAMILY (Trans)glycosidases 49 394 IPR017853 -
Car05g00730 425 Pfam Glycosyl hydrolase family 79, N-terminal domain 35 350 IPR005199 GO:0016020|GO:0016798
Car05g00730 425 PANTHER GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN 10 422 - -
Car05g00730 425 PANTHER HEPARANASE-RELATED 10 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00730 Car-Chr5 41382885 41396407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00730 10 425 Glycoside Hydrolase AT5G07830 62.796 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00730 K07964 - gmx:100807012 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00730 05 41382885 41396407 Car05g00730 05 41382885 41396407 ECH