Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00729 ATGTTTGGTTCAAAGAAATCTCCTTTGAAAGATACTAAACCTAGCTCAAAGCATAACCCCTTTGATTCTGATGAAGAGAAAAAGGATAACAGAAAGTATAATTCTTCAAGGAAGACTTCTTCTGGATATAACCTAGTTCAGGGAGAAACTAATACCAACCCCTTTGACGATGTTGATGCTCGTGGACACTCTTCGTCGCCGTATGCCGCGTCCTCCGGAAATCGAACCTTGTATAAGAACGATTTCCGGGATTCTGGGGGATTGGAGAATCAATCAGTAGAGGAATTGGAGAACTATGCTTTGTACAAGGCTGAGGAAACCACAAAATCGGTAAACAATTGTCGGAAGATAGCCGAGGAAATGCGAGAGGATGCTACCAAGACTTTGGTGATGCTGCATCATCAGGGCGAGCAGATTACAAGGAGTCATGATATTGCTGCTGGCATTGACCATGATTTAAGTCGGGGAGAAAAGCTTTTGGGAAGTCTTGGTGGCATGTTCTCCAAAACATGGAAACCAAAGAAGACAGGCACAATAAAAGGCCCTGTAATATTTGGAGAAGATCCAGTCAGAAGAAGTGCCAACCACTTGGACCAAAGAGAGAAATTAGGATTGAACTCTGCTCCTAAAGGGCAATCAAAGCCAAGGAAAACACTTCATGAGCCAACAAATGCATTTGAAAGAGTCGAGGTTGAAAAAGGGAAGCAAGATGATGCACTGTCAGATATAAGTGATCTCTTGGGAGAACTTAAAGGAATGGCCATTGACATGGGATCTGAAATTGAAAGGCAAAACAAAGCCATAGATGGGTTTGAAAAGGACACCGAGAAGTTGAATATCCGCATGAATGGTGCTAATCAACGTACTCTTCATTTACTTCGAAAATAG 888 0.4223 MFGSKKSPLKDTKPSSKHNPFDSDEEKKDNRKYNSSRKTSSGYNLVQGETNTNPFDDVDARGHSSSPYAASSGNRTLYKNDFRDSGGLENQSVEELENYALYKAEETTKSVNNCRKIAEEMREDATKTLVMLHHQGEQITRSHDIAAGIDHDLSRGEKLLGSLGGMFSKTWKPKKTGTIKGPVIFGEDPVRRSANHLDQREKLGLNSAPKGQSKPRKTLHEPTNAFERVEVEKGKQDDALSDISDLLGELKGMAIDMGSEIERQNKAIDGFEKDTEKLNIRMNGANQRTLHLLRK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00729 295 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 295 - -
Car05g00729 295 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 230 292 IPR000727 -
Car05g00729 295 CDD SNARE_Qc 235 288 - -
Car05g00729 295 Gene3D - 87 165 - -
Car05g00729 295 MobiDBLite consensus disorder prediction 1 75 - -
Car05g00729 295 MobiDBLite consensus disorder prediction 36 75 - -
Car05g00729 295 SUPERFAMILY SNARE fusion complex 230 291 - -
Car05g00729 295 SUPERFAMILY SNARE fusion complex 91 161 - -
Car05g00729 295 MobiDBLite consensus disorder prediction 10 35 - -
Car05g00729 295 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 295 - -
Car05g00729 295 MobiDBLite consensus disorder prediction 180 224 - -
Car05g00729 295 Gene3D - 219 295 - -
Car05g00729 295 SMART tSNARE_6 225 292 IPR000727 -
Car05g00729 295 SMART tSNARE_6 96 163 IPR000727 -
Car05g00729 295 Coils Coil 261 281 - -
Car05g00729 295 CDD SNARE_SNAP25N_23N_29N_SEC9N 98 162 IPR044766 GO:0005484|GO:0031201
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00729 Car-Chr5 41377243 41381699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00729 K18211 - gmx:100806698 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00729 05 41377243 41381699 Car05g00729 05 41377243 41381699 ECH