Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00700 ATGGGACAAGAGAATCACTTAGCTCAAAAGAGAACAAGCAGCACTGGAGGATTACCCACAACAACATCAACAACGACGTCGTCTCGAAACCGTAATCTGCCACGTggacgtcagatccagaaaaccttcaacaatataaagatcactatcctctgcggtttcgtAACAATACTCGTCCTACGTGGCACAATCGGAGTTAATCTCGGAACATCTCAAAACGACGCTGTTAATCAGAACGTCATCGAAGAAACCAACCGTATCCTCGCCGAgatccgatccgacgtcgatccgtcggatcggaaccaaaccgaAACGTTTCTTAGTCTCAATGAAACGTATGCGCTTGGTCCTAAGATTCGTAATTGGGATTCGGAAAGGAAAAATTGGCTCGATAGTAACCCTGAATACCCTAATTTTGTTAGGGGAAAACCTCGTATCTTGCTTCTAACTGGTTCGCCACCTAAACCGTGTGATAACCCTATTGGTGATCATTACCTTTTGAAATCTATCAAGAATAAGATCGACTATTGCAGATTGCATGGCATTGAAATTGTGTACAACATGGCACACTTGGACATGGAGCTTGCAGGGTACTGGGCCAAATTGCCCATGATACGGAGACTCATGTTATCACACCCTGAGGTGGAATGGATTTGGTGGATGGACAGTGATGCATTCTTCACTGACATGGTGTTTGAGCTTCCCATGAGTAAATATAATGATTATAATATGGTTATTCATGGGTATCCTGATTTGTTGTTTCAGCAGAATTCTTGGATTGCGATAAACACAGGGAGCTTTCTGTTTCGGAATTGCCAGTGGTCCTTGGATTTGCTTGATGAATGGGCACCCATGGGTCCGAAAGGCCCAATTCGAGAAGAGGCTGGGAAGATTTTGACGGCAAATCTCAAAGGAAGACCGGCATTTGAGGCTGACGATCAATCAGCTTTGATATACTTATTGTTGTCGAAGAAGGACAAATGGATGGACAAGGTATTTCTTGAGAATTCTTATTATTTGCACGGTTATTGGGCTGGGTTAGTGGATCGGTACGAAGAGATGATGGAGAAATATCATCCGGGGTTAGGGGATGAGAGGTGGCCTTTCGTGACACATTTTGTGGGGTGTAAGCCTTGTGGGAGTTATGGAGATTATCCGGTGGAGAGATGCCTTAGTAGCATGGAGAGGGCTTTCAATTTTGCTGATAATCAAGTGCTTAAACTCTATGGGTTTAGACACCGTGGATTGTTAAGCCCTAAAATCAAGCGGATTAGGAATGAGACGGTTACTCCTTTGGAGTTTGTAGACCAGTTGGATATACGAAGGCAACATGCAGGCAACATGGAATCAAGAAATTAA 1359 0.4032 MGQENHLAQKRTSSTGGLPTTTSTTTSSRNRNLPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGTSQNDAVNQNVIEETNRILAEIRSDVDPSDRNQTETFLSLNETYALGPKIRNWDSERKNWLDSNPEYPNFVRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDMELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYNDYNMVIHGYPDLLFQQNSWIAINTGSFLFRNCQWSLDLLDEWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSKKDKWMDKVFLENSYYLHGYWAGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQLDIRRQHAGNMESRN 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00700 452 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 142 288 IPR029044 -
Car05g00700 452 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 10 445 - -
Car05g00700 452 Pfam galactosyl transferase GMA12/MNN10 family 143 381 IPR008630 GO:0016021|GO:0016757
Car05g00700 452 MobiDBLite consensus disorder prediction 1 37 - -
Car05g00700 452 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 10 445 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00700 Car-Chr5 38996022 38999076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00700 1 452 Glycosyltransferase AT5G07720 77.342 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00700 K08238 - gmx:100793238 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00700 05 38996022 38999076 Car05g00700 05 38996022 38999076 ECH