Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00624 ATGCAGCAAAGCGACGCAGTTCACAAGGTTGAACCTTGTGATATATGTGGTGATGTTGGTTTTGCTGAAGTGAATGTTACTTGCTCTAAATGCAAGCTAACTCATGAACATATTTACTGCATGCGAATTAATCTCATGGAAGTTCCAGATGACTGGCTTTGTGAAGCATGCCAATCCAAAAATGCCACAACTTCACCATGTAAAGTGAACCAGGATTTTGGCTTGCAGACTTCCAAAAGGCAACAATCTTTTAAAACAGGCCGAGTTGGGAAAGTGAAGTACCTTCATGAGGATGAAGTTATTAAACTTTCTAGTTTTAATTTTTCCACAAAACCTTCTCAAGCATGCTCTTCTTTGCCGATGATCAGGAAGGCTATTCCTGGAAGCTCTACTTTGCCATTGAGCAGAAGGGCATCCAAAAGTGTTATTCCAAAGATTCCCACTATGACTCTGAAACCAAATCCTTGCATAGCATCTATGGAACATAGGAAGTTTCCAAGAAGTGGAGTTCATAAAGATCCAATTACTGATCAACATGCTTCATCATCAAAAGGACCAAGAAAGGAGCATAGACTTGTATCTGAGGGACGAGTAGGTGCACCAATACCTAATAGAAGAGTTCAAACTCTTAATCTTCTGACAGAAAAGCCTACCAAAGGGGCACTTTGTAAAGACTTATTAGAAAGAAAATCTTTACCTGTCGCTGTTTCAGGTGCTGTTGCTGAATGTAACAAAATTAATCTGGAAAAAAGCAACATTCAGAGTATTCATGAAAACTTCCATCACGATTATAAATATTTACCCTCTTCAGTTTCTGCTTGGAGTGGTCAATTCCAAATTCTTCAAGCAGCTTTATCTGGTGAATTTTATGACGGGTTTGAGGCCCAACCTCCATGCATTATTCATAGGAAAGCATATGAGCTTTCAAACAAAATGCCCTCAGTCCTGCAACTGGAATCACTGCCTGCTTTGAATGGCTTGGCTGATGCATTCCAGGACTGTTCTCCCAGTCTTCAAGATATAGCATTATATTTCTTTCCATCAGATAACAGTGAGAGATCCAGAAAGAACTTAAATAGCCTATTTAAGTTTATGAATGCTGAAAACTCAATGTTGAGAAGTTTTATTGATGGAGTTGAGTTGTTGGTCTTTACCTCGCATCAGCTTAATGAGGACTCAAGGGGTATTATTGCTGCAGTGAATGAAGGATATTTCCTGTGGGGAGTTTTTCGCTCAAAAAAAGCTTCTATTGCTAATGAAAGATTCACTGACATGGAGCCTGTTGATATGGATATCGATATGATGGGAGGAAATGACGTGGTGGGAAGAATTGATCATGTTCTGAATGACAATTCCAGTAATCTCTCTCAGTTACCTTTGGAAGGAACACCTCTTCCGAGCACCACTTTTAAGAGGGTAGAAGAAAGGACCTTAATCCCTTCAAGCAATTTGAATTTATATCGTGGGGACAAATCAATTTTGTCTGAAAATCTTGATAAGAAAATAAAGTCTGAGCATTCTTCTGACCCATCCTCATGGAGCCCTATCAAGAAATATCATAAAATGTTAGACATACTCGATGCTCCACCAGGCTTTGAAGCTCATGGTAAGAATTTTTCATCGTGA 1626 0.3918 MQQSDAVHKVEPCDICGDVGFAEVNVTCSKCKLTHEHIYCMRINLMEVPDDWLCEACQSKNATTSPCKVNQDFGLQTSKRQQSFKTGRVGKVKYLHEDEVIKLSSFNFSTKPSQACSSLPMIRKAIPGSSTLPLSRRASKSVIPKIPTMTLKPNPCIASMEHRKFPRSGVHKDPITDQHASSSKGPRKEHRLVSEGRVGAPIPNRRVQTLNLLTEKPTKGALCKDLLERKSLPVAVSGAVAECNKINLEKSNIQSIHENFHHDYKYLPSSVSAWSGQFQILQAALSGEFYDGFEAQPPCIIHRKAYELSNKMPSVLQLESLPALNGLADAFQDCSPSLQDIALYFFPSDNSERSRKNLNSLFKFMNAENSMLRSFIDGVELLVFTSHQLNEDSRGIIAAVNEGYFLWGVFRSKKASIANERFTDMEPVDMDIDMMGGNDVVGRIDHVLNDNSSNLSQLPLEGTPLPSTTFKRVEERTLIPSSNLNLYRGDKSILSENLDKKIKSEHSSDPSSWSPIKKYHKMLDILDAPPGFEAHGKNFSS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00624 541 PANTHER - 6 539 - -
Car05g00624 541 MobiDBLite consensus disorder prediction 167 196 - -
Car05g00624 541 MobiDBLite consensus disorder prediction 167 195 - -
Car05g00624 541 PANTHER ZINC ION-BINDING PROTEIN 6 539 - -
Car05g00624 541 SUPERFAMILY FYVE/PHD zinc finger 5 61 IPR011011 -
Car05g00624 541 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 86 IPR013083 -
Car05g00624 541 SMART PHD_3 12 58 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00624 Car-Chr5 34319852 34331104 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00624 - - cam:101495222 1077.77