Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00623 ATGGCTCTTCTCACTCTTGCACTCCTTCTTTTGGCCTTCAGTGGCTCCTCAAGTGGCTCTTGGTGTGTTTGCAAGGATGGAAGTGAAACAATACTTCAAAAAACATTAGATTATGCTTGTGGAGCTGGTGCTGATTGTAATCCTATAAAACAAAATGGGCCTTGTTTTCAACCCAACACTGTTAAAGCTCACTGTAATTATGCAGTTAACAGTTATTTCCAAAGGAAGGGACAAACTCAAGGGTCATGTGAATTTGCTGGAACAGCCACAGTTACTGCCTCAGATCCTAGCACTACAGGTTGTTTGTACCCTGCAAGCGCCAGTACTACAGGCACTAGCACAACCACACCAACCATGGGAAACCCTTCCACTGGTGGAGTATTGGGAGGCATTGGCAATGGTATGGGCCCATCTGGAATTGGAACCAATTCAGATAATAGTCATGGTGGGCTTAAACTTTTATATACTAGTTTATTCTTTCCCTTTTCAATATCTATGTTTTCAAGCATGGTGATGATGATTATGCTTTGGTAA 534 0.4232 MALLTLALLLLAFSGSSSGSWCVCKDGSETILQKTLDYACGAGADCNPIKQNGPCFQPNTVKAHCNYAVNSYFQRKGQTQGSCEFAGTATVTASDPSTTGCLYPASASTTGTSTTTPTMGNPSTGGVLGGIGNGMGPSGIGTNSDNSHGGLKLLYTSLFFPFSISMFSSMVMMIMLW 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00623 177 Gene3D - 16 116 - -
Car05g00623 177 Pfam X8 domain 21 90 IPR012946 -
Car05g00623 177 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 164 - -
Car05g00623 177 PANTHER BETA-1,3 GLUCANASE 1 164 IPR044788 -
Car05g00623 177 SMART X8_cls 20 103 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00623 Car-Chr5 34296193 34304243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00623 21 114 Miscellaneous Gene Families AT2G16230 44.330 1.93e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00623 - - gmx:100812033 218.009