Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03494 ATGAAATTGAAGTCTAAGAAAGGATGGAAATCTATTGCACCTCTTCATTTAAAAGGAAAATCAGTGACTCGTTTTTCATTATTTCGCAAAGTCAACTCAGCTAGCCATGCACCTGGAAAAACTCCAGTTTATCTCAATGTGTATGACTTGACGCCCATGAATGGTTATGTCTATTGGGCCGGCCTCGGTATCTATCACTCCGGTGTAGAAGTTCATGGTGTAGAATATGCATTTGGAGCTCATGACTACCCAACAAGCGGTGTTTTTGAGGTTGAACCTCGACAATGTCCAGGCTTCAAGTTCAGGAAGTCGATATTCATCGGAACTACATCTTTGGATCCTGTTGAGGTTAGAGAATTCATGGAATGCGAGTCGGCAAACTACAACGGTGATACATATCACTTAATTGCTAAGAACTGCAATCACTTCTGCAAAGACATATGCTATAAGCTGACAGGGAAATCAATTCCAACTTGGGTAAATCGGCTTGCCAGGCTAGGTTCAATTTGCAACTGCATTCTTCCCGAAGCACTAAGAATTTCGGCTGTGGGACATGATCCTAATTATGAGGTTCATGATAGTGAAAAGAGAAGGCTAAAAAGTGCATTCAATTCATTGTCCTCAATTTCAATGCGTCAAAAGCAGCTATCCAAATCTTCACTGTTTCTACAATCACCTTTAAGAGGTTGTTTGTCATCAAAGTGGCCATCATGGGAATTGAGCAAGTCTATTAATCGTTCCTTCAAAGAAAGGTAA 756 0.4061 MKLKSKKGWKSIAPLHLKGKSVTRFSLFRKVNSASHAPGKTPVYLNVYDLTPMNGYVYWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSIFIGTTSLDPVEVREFMECESANYNGDTYHLIAKNCNHFCKDICYKLTGKSIPTWVNRLARLGSICNCILPEALRISAVGHDPNYEVHDSEKRRLKSAFNSLSSISMRQKQLSKSSLFLQSPLRGCLSSKWPSWELSKSINRSFKER 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03494 251 PANTHER DESI-LIKE PROTEIN 2 251 - -
Car04g03494 251 SMART DUF862_2a 41 179 IPR008580 GO:0008233
Car04g03494 251 Pfam PPPDE putative peptidase domain 42 176 IPR008580 GO:0008233
Car04g03494 251 Gene3D PPPDE domains 36 186 IPR042266 -
Car04g03494 251 ProSiteProfiles PPPDE domain profile. 41 178 IPR008580 GO:0008233
Car04g03494 251 PANTHER DESUMOYLATING ISOPEPTIDASE 2 251 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03494 Car-Chr4 64094698 64097009 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03494 K22763 - gmx:100788399 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03494 04 64094698 64097009 Car04g03494 04 64094698 64097009 ECH