Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03340 ATGGcttcttcttcttctcctcctcaatcttcttctccttctccttctccttcctatatcactcaccttcccattcctccatcttctccttctAACTCCAGTGAAAAGATTCTAGAAGGAGACGAACCTCGCGTTCCAATTCATGTTGTGACGAAAGCGTCTCAACTTCCTGTTGAGTTTTTGGAACCTTCTCCTCAATCCAAGATCGTCATTGGTTTTGACTGTGAGGCTGTTGACTTGTGTCGCTATGGAACTCTTTGCATAATGCAGCTTGCATTTCCTGATGCTATATACCTGGTTGATGTAATTGAAGGGGGGGATGTGCTTATGAAAGCATGTAAGCACGCACTTGAGTCTGATTATGTCACAAAAGTGATTCATGATTGCAAACGCGACAGTGAGGCATTGTACTTTCAGTTCGGCATCAAGTTAAACAATGTGGTGGATACCCAGATTGCTTATGCGCTTATAGAAGAGCAAGAAGGACAAAAGAGATTGCCAGATGACTATATTTCACTTGTTGGTCTCCTTGCAGATCCACGTTATTGTGGCTTGTCATATGTTGAGAAGGAAGAAGTTCGTGTTCTCCTTCGACAGGACCCCAAGTATTGGACTTACAGACCTTTATCTAAACAAATGATCCGCAATGCCGCTGATGACGTCCGTTTCCTTCTCTACATTTATGACCAAATGATGGCAAAATTAACTGAACGGTCTTTATGGCATCTTGCTGTTCGTGGTGCCTTGTACTGCCGATGTTTCTGTGTGAACAGTAATGATTATGCTGATTGGCCATCTCTACCTCCAATTCCAGATAAGCTGAAAGTTGATGGAAATGGTCCCGAGGAAGAAATTCTTTCAGTTCTTGATGTTCCACCAGGCAAGATGGGATGCATTATTGGAAAAAAAGGGGCTTCAATTTTGTCAATTAAGGAGTCTTGCAATGCGGAAATTCTCATTGGAGGTGCCAGGGGTCCACCTGACAAGGTCTTCATCATAGGACCGGTGAAGCAGGTGAAGAAAGCCGAGGCTATGTTGAGGGGTAGACTATTGTATCTGTAA 1062 0.3974 MASSSSPPQSSSPSPSPSYITHLPIPPSSPSNSSEKILEGDEPRVPIHVVTKASQLPVEFLEPSPQSKIVIGFDCEAVDLCRYGTLCIMQLAFPDAIYLVDVIEGGDVLMKACKHALESDYVTKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYALIEEQEGQKRLPDDYISLVGLLADPRYCGLSYVEKEEVRVLLRQDPKYWTYRPLSKQMIRNAADDVRFLLYIYDQMMAKLTERSLWHLAVRGALYCRCFCVNSNDYADWPSLPPIPDKLKVDGNGPEEEILSVLDVPPGKMGCIIGKKGASILSIKESCNAEILIGGARGPPDKVFIIGPVKQVKKAEAMLRGRLLYL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03340 353 CDD Egl_like_exo 60 255 - -
Car04g03340 353 Gene3D K Homology domain, type 1 274 350 IPR036612 GO:0003723
Car04g03340 353 SUPERFAMILY Ribonuclease H-like 11 262 IPR012337 -
Car04g03340 353 Gene3D - 1 253 IPR036397 GO:0003676
Car04g03340 353 SMART 35exoneu6 47 236 IPR002562 GO:0003676|GO:0006139|GO:0008408
Car04g03340 353 CDD KH-I 289 346 - -
Car04g03340 353 Pfam 3'-5' exonuclease 61 235 IPR002562 GO:0003676|GO:0006139|GO:0008408
Car04g03340 353 MobiDBLite consensus disorder prediction 1 38 - -
Car04g03340 353 SMART kh_6 283 351 IPR004087 GO:0003676
Car04g03340 353 PANTHER - 20 350 - -
Car04g03340 353 ProSiteProfiles Type-1 KH domain profile. 284 346 - -
Car04g03340 353 Pfam KH domain 289 347 IPR004088 GO:0003723
Car04g03340 353 MobiDBLite consensus disorder prediction 10 24 - -
Car04g03340 353 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 280 349 IPR036612 GO:0003723
Car04g03340 353 PANTHER EGALITARIAN, ISOFORM B 20 350 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03340 K18740 - gmx:100788577 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03340 04 61832169 61837833 Car04g03340 04 61832169 61837833 ECH