Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03318 ATGTCTTCGTCTTCTTCTTTTTCTCCCGCTAACGATGCTGTTATGCGCAACCGCATCCTCTCTACCAACCTCTACTTCGATATCCCTCCGTTCAAAGTTCCGCTTATCTACTCCAATTCTTACGATGTATCCTTTCTCGGCATAGAGAAACTGCATCCTTTTGATTCGTCCAAATGGGGACGAATTTGTCGCTTCCTTGTTTCTTTTGGTGTTCTGGATAAAAAGTGTATTGTTGAGCCTCTTGAAGCTTCTAAAGATGACCTTCTAGTGGTACACTCAGAATCATACTTGAATAGTTTGAAGGAAAGTTCGAATGTTGCCAAGATAATTGAGGTCCCTCCTGTGGCATTTTTTCCCAATTGTCTTGTGCAACATAAAGTTCTTTTCCCATTTAGGAAACAGGTTGGAGGAACTATATTGGCTGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTGGGAGGTGGTTTTCATCACTGCTCTGCAGAAAAAGGAGGTGGATTTTGTGCCTACGCAGATATTTCTCTATGCATCCACTTTGCTTTTGTTCAGTTGAATATATCAAGGGTGATGATTATTGATCTTGATGCACATCAAGGAAATGGTCATGAAATGGACTTCGCCGATGATAGCCGAGTCTATATTCTGGATATGTATAACCCTGGAATTTATCCTTTGGATTATGAAGCAAGAAATTACATAAATCAGAAAGTTGAAGTAAAGAGCGGGACCCGTACAGAAGAGTACCTGCAGAAACTAGATGAAGCACTCGAGGTTGCTGGGCGAAGGTTTAACCCTGAATTGTTAGTTTATAATGCTGGAACTGACATTCTAGAAGGTGACCCATTAGGAAGGTTGAAGGTAATGTCATTCTTGGATTCAATTTATTGCTGTAAATTGTAA 906 0.4062 MSSSSSFSPANDAVMRNRILSTNLYFDIPPFKVPLIYSNSYDVSFLGIEKLHPFDSSKWGRICRFLVSFGVLDKKCIVEPLEASKDDLLVVHSESYLNSLKESSNVAKIIEVPPVAFFPNCLVQHKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFVQLNISRVMIIDLDAHQGNGHEMDFADDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTRTEEYLQKLDEALEVAGRRFNPELLVYNAGTDILEGDPLGRLKVMSFLDSIYCCKL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03318 301 PRINTS Histone deacetylase superfamily signature 267 277 IPR000286 -
Car04g03318 301 PRINTS Histone deacetylase superfamily signature 190 205 IPR000286 -
Car04g03318 301 PRINTS Histone deacetylase superfamily signature 156 179 IPR000286 -
Car04g03318 301 PANTHER HISTONE DEACETYLASE 11 10 290 - -
Car04g03318 301 SUPERFAMILY Arginase/deacetylase 30 289 IPR023696 -
Car04g03318 301 Pfam Histone deacetylase domain 52 289 IPR023801 -
Car04g03318 301 PANTHER HISTONE DEACETYLASE 11 10 290 - -
Car04g03318 301 CDD HDAC_classIV 52 289 IPR044150 GO:0004407|GO:0016575
Car04g03318 301 Gene3D Histone deacetylase domain 33 298 IPR037138 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03318 K11418 - gmx:100781276 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03318 04 61647576 61652395 Car04g03318 04 61647576 61652395 ECH