Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03305 atgatattttattatattaaAGGGCTACATTATCACCATACAACCTTCACTCACACACACTTCAATGGAATCATAACAACAACTTCTTCAACTTCCAATAAAAAGAAAAACACATTTCTCtctgttctgtttctctgttctgttctgttttgCTTTGCAACAGCATTCATGGAACGTGCTCGTAGACTCGCAAACCGTGCAACTCTGAAGCGTCTTCTTTCAGAGGCAAAACAAAATCGAAACAATGAAACAATATGGAACACTTCCACAACACCAATCCCTTCATCAAGGTACGTTTCCTCTGTTTCAAACTCTGTTCACAGAACAAGAGGATCCAAACAAGATAACATTTTCACAAGAAAACCCAACGTTCCACGAAGCGTGGTTGGTTTTCTCGGTATTGGGTACCCTTCACAATCTCGATCCATTAGCGTAGAAGCTTTAAAACCAAGTGACACATTCCCAAGACGCCATAACTCAGCAACACCAGAAGAACAAACAAAAATGGCTGAATCATGTGGTTTCAATACCCTTGATTCACTTGTTGATGCAACAGTTCCGAAATCAATCCGTTTAAAAGAAATGAAATTTAACAAATTCGATGGAGGGTTAACAGAAGGTCAAATGATTGAACACATGAAATATTTAGCTTCAAAAAACAAGATTTTTAAATCTTTCattggaatgggttactataacacacatgttccacctgtgattttgaggaacataatggagaatcctgcttggtatactcagtatacaccttatcaagccgagatttcacaaggtcggcttgaatcacttttgaattttcaaaccatgattactgatctcactggtttgcctatgtcaaatgcttcattgcttgatgaaggtactgctgcagctgaagcaatgtctatgtgtaataatattcaaaagggtaagaaaaaaacttttattattgctagtaattgtcatccacaaacaattgacatatgtaagacaagagctgatggatttgagttgaaagttgtggtgaaagatgttaaggatattgattacaaatctggtgatgtttgtggtgttcttgttcagtatcctggtactgaaggtgaggttttggattatggtgactttattaagaaggctcatgctaatgaggttaaggttgttatggcaagtgatttgttggcattgactgttttgaagcctcctggtgagtttggtgctgatattgttgttggttcagctcagagatttggtgttcctatgggatatggaggtcctcatgctgcttTTTTGGCTACATCACAAGAGTATAAGAGGATGATGCCTGGTAGAATTATTGGTGTTAGTGTTGATTCTTCTGGTAAGAGTGCTTTGAGGATGGCTATGCAAACTAGGGAGCAGCATATTCGTAGGGATAAGGCTACCAGCAACATTTGTACTGCTCAGGCATTGCTTGCAAACATGGCTGCCATGTATGCTGTATATCATGGACCTGAAGGACTTAAAACCATTGCACAAAGGGTTCATGGTCTTGCTGGTGTATTTGCTCTTGGATTAAAGAAGCTTGGAACTGTGGAAGTTCAGGATCTTCCTTTCTTTGACACTGTGAAGATTAAGACTTCAAATGCCAAAGCAATTGCAGATGCTGCTGTCAAAAGTGAAATCAATTTGAGAGTTGTAGATGGAAACACTATCACTGTTGCTTTTGATGAAACAACCACATTAGAGGATGTTGATAAGCTTTACAAAGTTTTTGCTGGTGGCAAATCTGTCTCATTCACAGCTGCATCTCTTGCAGCTGAAGTTCAGAATGCAATTCCTTCTGGATTAGTTAGGGAGAGCCCTTATCTGACACACCCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTGAGATACATTCATAGGCTACAATCAAAAGATCTCTCACTTTGCCACAGTATGATCCCACTTGGATCTTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCTAGCTTCACTGATATTCACCCTTTTGCACCAACTGAACAGGCTCAAGGTTATCAGGAAATGTTCAACAATTTGGGTGAACTGTTGTGTACCATCACTGGATTTGACTCATTCTCTCTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTCATGGTTATTCGTGCATATCATTTGTCGAGAGGCGACCACCACCGCAATGTTTGCATTATACCGGTCTCAGCACATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCACCATAGGAACTGATGCTAAGGGAAACATTAACATTGAAGAGTTGAAGAAGGCTGCTGAAAAACATAAGGACAACTTATCTGCATTTATGGTAACATATCCTTCAACTCATGGTGTTTATGAAGAAGGTATTGATGATATTTGCAAGATCATCCATGATAATGGAGGTCAAGTATACATGGATGGTGCAAACATGAATGCACAGGTAGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCATAAGACATTTTGCATTCCTCATGGAGGAGGAGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCCTCACATCCTGTGGTGCCAACTGGAGGAATTCCTGCCCCTGAAAAATATCAACCACTTGGTTCCATCTCTGCTGCACCTTGGGGATCAGCACTCATATTGCCAATCTCTTACACATACATAGCCATGATGGGTTCTCAAGGACTCACTGATGCTTCAAAGATAGCCATTTTGAATGCAAACTACATGGCAAAACGATTGGAGAACTATTACCCGGTTCTTTTCCGCGGAGTCAATGGAACAGTTGCTCATGAGTTCATTATTGACTTAAGAGGCTTTAAGAACACTGCTGGAATAGAGCCTGAAGATGTTGCGAAACGTCTCATGGATTATGGATTTCATGGACCAACAATGTCATGGCCTGTTCCTGGTACACTCATGATTGAACCTACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTTTGTGATGCTCTTATTTCCATCAGAAAAGAAATTGCTGAGGTTGAGAAAGGAAATGCTGACATTCACAACAATGTCCTTAAGGGCGCCCCTCATCCACCATCACTGCTCATGGCTGATGCATGGACAAAACCATACTCCAGGGAGTATGCAGCCTTCCCTGCTGCATGGCTCCGTGTTGCCAAGTTTTGGCCTACCACAGGACGTGTTGATAATGTGTATGGTGACCGCAACCTGATTTGCACACTTCAGCCAGCATCACAGGGTGTTGAAGAACAAGCAGCTGCCACAGCATAA 3345 0.339 MIFYYIKGLHYHHTTFTHTHFNGIITTTSSTSNKKKNTFLSVLFLCSVLFCFATAFMERARRLANRATLKRLLSEAKQNRNNETIWNTSTTPIPSSRYVSSVSNSVHRTRGSKQDNIFTRKPNVPRSVVGFLGIGYPSQSRSISVEALKPSDTFPRRHNSATPEEQTKMAESCGFNTLDSLVDATVPKSIRLKEMKFNKFDGGLTEGQMIEHMKYLASKNKIFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGFELKVVVKDVKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKKAHANEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKSALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFALGLKKLGTVEVQDLPFFDTVKIKTSNAKAIADAAVKSEINLRVVDGNTITVAFDETTTLEDVDKLYKVFAGGKSVSFTAASLAAEVQNAIPSGLVRESPYLTHPIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFNNLGELLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNINIEELKKAAEKHKDNLSAFMVTYPSTHGVYEEGIDDICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPEKYQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLENYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRKEIAEVEKGNADIHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAAWLRVAKFWPTTGRVDNVYGDRNLICTLQPASQGVEEQAAATA 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03305 1114 SUPERFAMILY PLP-dependent transferases 157 583 IPR015424 -
Car04g03305 1114 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 148 1105 IPR003437 GO:0004375|GO:0006544
Car04g03305 1114 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 57 1114 IPR020581 GO:0004375|GO:0006546
Car04g03305 1114 Coils Coil 773 793 - -
Car04g03305 1114 Gene3D Aspartate Aminotransferase, domain 1 226 579 IPR015422 GO:0003824
Car04g03305 1114 TIGRFAM gcvP: glycine dehydrogenase 157 1098 IPR003437 GO:0004375|GO:0006544
Car04g03305 1114 Pfam Glycine cleavage system P-protein 157 583 IPR020581 GO:0004375|GO:0006546
Car04g03305 1114 Pfam Glycine cleavage system P-protein 595 876 IPR020581 GO:0004375|GO:0006546
Car04g03305 1114 CDD GDC-P 206 583 IPR020581 GO:0004375|GO:0006546
Car04g03305 1114 Gene3D Aspartate Aminotransferase, domain 1 918 1052 IPR015422 GO:0003824
Car04g03305 1114 CDD GDC-P 626 1021 IPR020581 GO:0004375|GO:0006546
Car04g03305 1114 Gene3D - 237 497 IPR015421 GO:0003824
Car04g03305 1114 Gene3D - 665 917 IPR015421 GO:0003824
Car04g03305 1114 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 57 1114 - -
Car04g03305 1114 SUPERFAMILY PLP-dependent transferases 603 1100 IPR015424 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03305 K00281 - gmx:100819714 1911.35