Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03298 ATGGCGGAAACACAACCGTTGCAAAAACCTTCCTACATTTCCTTACAAGAACTTCAAAAACACAACAAACGTGGCGACGCATGGATCTCCATCCATGGCAAAATCTACGACGTCTCTAAATGGTCCAACCACCATCCCGGCGGCGAACTTCCTCTCCTCAACCTCGCCGGTCAAGACGTCACCGACGCTTTCCTCGCTCTCCACCCTCCCACCGCTTACACCCACCTGAACAGATTCTTCACCGGCAGCTACCTCTCCGACTATTCCGTCTCCGACGTCTCACGTGATTACCAGAAACTCTTCTCCGAACTCACCAAAATGGGTCTATTTGAAACTAAAGGACACGGTGTTTTACTCTTGCTTTCGTTAATCGTTGTTATGTTCTGTGTCAGTGTTTACGGTGTTCTGTTTTCACAAAGCGCGTGGGTGCGCGTGCTTTGTGGTGGTTTAATGGGTTTTCTTTGGATTCAAAGTGGTTGGCTTGGTCATGATTCTGGTCATTATCAAATCATGGTGAACCCTAATTGGAACCGTTTTATTCAGATCCTTTCTGGTAATGTTCTTGCTGGTATAAGCATTGAATGGTGGAAATGGAATCACAATGCACATCACATTGCTGTTAATAGTCTTGATTTTGATCCTGATCTTCAACATTTACCATTTTTTGTTGTTTCTTCAAAGTTCTTTACTTCCCTCACTTCTTGTTTTTATGGTAGGAAAATGAACTTTGATTCTTTTGCTAGGTTCTTGGTTAGTTACCAACATTGGAGTTATTACCCTGTTATGTGTTTTGCTAGGTTGAATTTGTTTGCTCAAAGTTTCTTTTTGTTGTTGTCAAACAGGAAGGTTCCTAATAGAAAGATGGAACTTTTAGGGTTGCTTATGTTTTGGGTTTGGTACCCTTTGTTGGTTTCTTGTTTACCTAATTGGGGTGAAAGGGTTTTGTTTGTCATTGCTAGTTTTTCTGTTACTGGGATTCAACATGTTCAGTTCACTTTGAATCATTTTTCTTCAAGTGTTTATGTTGGTCCACCAACTGCTCATGATTGGTTTGAGAAGCAGGCTAATGGGACTCTTGATGTCAACTGTTCTTCTTGGATGGATTGGTTTCACGGTGGTTTGCAATTTCAGATCGAACACCATCTGTTTCCAAGGCTTCCGAGGTGTAATCTGAGGAAAATTGCACCTTTGGTTAAGGATCTTTGCAAAAAACATAATCTTCCTTATAATTGTGTCTCGTTCTGGAAGGCGAATGTGCTTACGATCCAGACTTTGAGGAATGCTGCTTTGCAGGCTCGCGATCTTACTAAACCGGTTCCGAGAAACTTAGTTTGGGAAGCTGTTAATACTCATGGATGA 1359 0.4194 MAETQPLQKPSYISLQELQKHNKRGDAWISIHGKIYDVSKWSNHHPGGELPLLNLAGQDVTDAFLALHPPTAYTHLNRFFTGSYLSDYSVSDVSRDYQKLFSELTKMGLFETKGHGVLLLLSLIVVMFCVSVYGVLFSQSAWVRVLCGGLMGFLWIQSGWLGHDSGHYQIMVNPNWNRFIQILSGNVLAGISIEWWKWNHNAHHIAVNSLDFDPDLQHLPFFVVSSKFFTSLTSCFYGRKMNFDSFARFLVSYQHWSYYPVMCFARLNLFAQSFFLLLSNRKVPNRKMELLGLLMFWVWYPLLVSCLPNWGERVLFVIASFSVTGIQHVQFTLNHFSSSVYVGPPTAHDWFEKQANGTLDVNCSSWMDWFHGGLQFQIEHHLFPRLPRCNLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRNAALQARDLTKPVPRNLVWEAVNTHG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03298 452 PIRSF FA_sphingolip_des 1 440 IPR012171 GO:0016491
Car04g03298 452 CDD Delta6-FADS-like 145 407 - -
Car04g03298 452 Pfam Cytochrome b5-like Heme/Steroid binding domain 15 83 IPR001199 -
Car04g03298 452 PANTHER FATTY ACID DESATURASE 2 10 451 IPR012171 GO:0016491
Car04g03298 452 Gene3D - 2 84 IPR036400 -
Car04g03298 452 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 10 85 IPR001199 -
Car04g03298 452 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 10 451 - -
Car04g03298 452 SMART Cyt_b5_2 13 85 IPR001199 -
Car04g03298 452 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 7 86 IPR036400 -
Car04g03298 452 Pfam Fatty acid desaturase 142 411 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03298 Car-Chr4 61485503 61487506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03298 9 452 Lipid Metabolism Gene Families AT2G46210 62.387 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03298 K21737 - ini:109158372 755.747