Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03295 ATGGAGAACATTACAAAAGATGCATCCCTAAACAGCATCAATAATGATCAGCCATATAGAACTTGGTATCACTTTCAGCCCCCAAAAAATTGGATGAATGATCCTAATGGACCAATGTACTATAAAGGAGTTTACCATTTCTTCTACCAACATAACCCAGATGGAGCAACCTTTGGTAAAAAAATGGTATGGGGTCATTCTATATCCTATGATCTCATCAATTGGACACATCTAAAGCATGCTATTAGACCAGATTCTATTGGTGACATAAACAGTTGCTTCTCAGGCTCAGCAACTATACTCCCAGGTGAAAAACCTGTTATATTGTACACAGGAATTGATGGAAAAAAACACCAAGTTCAAAACTTAGCTTTTCCAAAGAATCTATTAGACCCTTTCTTAAGAGAATGGGAAAAACATCCTCAAAACCCTGTCATGACTCCACCTAGTGAAGTTGAAGAGGATAATTTTAGAGACCCTTCAACTGCATGGCAAGGAAAAGATGGTAAATGGAGAGTAGTAATTGGTGCTCAAAATGGTGATGAAGGAAAAGCTATTCTATACAAAAGTGATGATTTTTTTGATTGGAAAGTTGACCCTAATCCTTTTTTTGCAACAGATGGTACTGGAGTTTGTGAATGTCCTGATTTTTTTCCTGTTTATGTTAATAGCACAAATGGGGTGGATACATCTGTGGAAAATTCAAGTGTTAGACATGTTTTTAAGATAAGTTATTTACGTAGACATCATGATTACTATTTTATTGGGAGTTATGTGTCTGATTCTGATAAGGAAAAGTTTGTTCCTGATGTAAAATATACTGGAAGTTGGAAGGAATTAAGATTTGATTATGGAAATTTTTATGCTTCAAAGTCATTTTTTGATTATGCTAAGAATAGGAGAATATTATGGGGTTGGGTGGAAGAAAATGACTCTAGACAAGATAGCATTGAAAGAGGATGGGCTGGTTTACAGACAATTCCAAGGAAGTTTTGGCTTGATAAAGATGGGAAGCAATTAATGCAATGGCCAATTGAAGAGTTAGAAAAACTACGTGACAATCAAATCAATATCACAGGAGAGACACTCCTAGGTGGATCAACCCTTGAAGTACAAGGTATCACTGCATCTCAGGCTGATGTGGAAGTCTTGTTTGAGCTACCTGATCTACAAAATGCTGAGTTGATAGATCCAAGTGAAGTTGATCCTCAAATACTTTGCAGTGAACAATATGCTTCAAGAAATGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCAAAGGATCAGACAGAGAAGACTGCAATATTTTTCAGGATATACAGAACACTTGATAAATATGTATGCTTGATGTGCAGTGACCAGAGCAGGTCGTCATTGCGGCAGGAGACTGAAAAAACCACATATGCAACTATCTTTGACATAGATCCTAATCTGAAAACAATTTCACTTAGAACTTTGATTGACCGGTCCATTATTGAGAGTTTTGGTGATGGAGGGAAGGTTTGCATAACAAGTAGAGTTTATCCCTCATTGGCTATAGAGAAAGATGCACATCTCTATGTATTCAACAATGGAAGCCAGAGTGTAGTTATCTCAAAACTAAATGCTTGGAGTATGAAGCAAGCAGAGTTTGGCATGGAAAATATAATATAG 1659 0.3665 MENITKDASLNSINNDQPYRTWYHFQPPKNWMNDPNGPMYYKGVYHFFYQHNPDGATFGKKMVWGHSISYDLINWTHLKHAIRPDSIGDINSCFSGSATILPGEKPVILYTGIDGKKHQVQNLAFPKNLLDPFLREWEKHPQNPVMTPPSEVEEDNFRDPSTAWQGKDGKWRVVIGAQNGDEGKAILYKSDDFFDWKVDPNPFFATDGTGVCECPDFFPVYVNSTNGVDTSVENSSVRHVFKISYLRRHHDYYFIGSYVSDSDKEKFVPDVKYTGSWKELRFDYGNFYASKSFFDYAKNRRILWGWVEENDSRQDSIERGWAGLQTIPRKFWLDKDGKQLMQWPIEELEKLRDNQINITGETLLGGSTLEVQGITASQADVEVLFELPDLQNAELIDPSEVDPQILCSEQYASRNGIIGPFGLLALASKDQTEKTAIFFRIYRTLDKYVCLMCSDQSRSSLRQETEKTTYATIFDIDPNLKTISLRTLIDRSIIESFGDGGKVCITSRVYPSLAIEKDAHLYVFNNGSQSVVISKLNAWSMKQAEFGMENII 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03295 552 SUPERFAMILY Arabinanase/levansucrase/invertase 15 345 IPR023296 -
Car04g03295 552 Gene3D Glycosyl hydrolase domain; family 43 28 356 IPR023296 -
Car04g03295 552 SUPERFAMILY Concanavalin A-like lectins/glucanases 344 543 IPR013320 -
Car04g03295 552 Pfam Glycosyl hydrolases family 32 C terminal 347 540 IPR013189 -
Car04g03295 552 CDD GH32_Fruct1-like 30 333 - -
Car04g03295 552 Pfam Glycosyl hydrolases family 32 N-terminal domain 24 344 IPR013148 -
Car04g03295 552 Gene3D - 357 541 - -
Car04g03295 552 SMART glyco_32 24 501 IPR001362 GO:0004553|GO:0005975
Car04g03295 552 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 13 549 - -
Car04g03295 552 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 13 549 - -
Car04g03295 552 ProSitePatterns Glycosyl hydrolases family 32 active site. 24 37 IPR018053 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03295 Car-Chr4 61449795 61455440 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03295 29 546 Glycoside Hydrolase AT1G55120 54.545 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03295 K01193 - gmx:100806220 891.338