Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03293 ATGTACTACAAAGGTGTTTACCACCTTTTCTACCAACATAATCCTTATGCAGCAACATTTGGTGATAGGATTATATGGGCTCATTCAGTATCCTATGATCTCATAAGTTGGATTCATCTAAATCATGCTATTGAGCCAAGTGAGCCTTATGACATCAACAGTTGTTGGTCAGGCTCAGCCACTATACTCCCAGGTGAAAAACCTGCTATTTTGTACACAGGAATTGATAAAAATAAACATCAAGTTCAGAACTTAGCTTTTCCAAAGAATCTATCAGACCCTTTCTTAAGGGAATGGGAAAAACATCCTCAAAACCCTGTCATGACTTCACCTAGTGGAGTTGAAAAGGATAATTTCAGAGACCCTTCAACTGCATGGCATGGAAATGATGGAAAATGGAGGGTAATCATTGGTGCTCAAAATGGTGATGAAGGGAAGACTATACTCTACCAAAGTGATGATTTTCTTAATTGGACTGTGAATCCAAACCCTTTTTTTGCAACAGATGACACTGGAGTTTGTGAATGTCCTGAGTTTTTTCCTGTTTATATAAATAGCACAAATGGGGTGGATACATCTGTGGAAAATCAAAGTGTTAGACATGTTTTGAAGATAAGCTATATAAGGATACAGCATGACTACTATTTTGTTGGTAAATATGTTTCTGAGAAGGAAAAGTTTACTCCTGATGTAGAATTTAAAGGAACTAGTTCAGATTTAAGGTTTGACTATGGTAAATTTTATGCCTCAAagtcattttttgactatgctaagaataggaggatattgtggGGATGGGTGAATGAGTCTGACACTACACAAGATGACATTGAGAAAGGATGGGCTGGTCTACAGACAATTCCAAGGCAAGTTTGGCTTGATAAAAGTGGGAAGAGattgatgcagtggccaattgaagagctagaaaatctaagagacaaacaaatcagtattacagaacagaaacttgaaagtggatcaactcttgaagtcttaggtatcactgcatcacagGTTGATGTAGAAGTGTTGTTTGAGCTACCTGAACTAGAAAGTGGTGAGTGGTTAGATCCAAGTGAAGTTGATCCTCAACTACTATGTAGCAAACAATATGAATCAAGAAGTGGCAAAATAGGACCATTTGGTTTGTTAGCTTTAGCTTCAAAGGATCTCACAGAGCAAACTGCAGTGTCTTTTCAAATATATAGAGCTCCCAATAGATATATATGTCTAATGTGCAGTGACCAGAGCAGGTCTTCGTTGCGTCAGGACCTTGATAAAACCACATATGGAACTATCTTTGACATAGATGCCAATCTCAAAACAATTTCACTAAGAAGCTTGATTGACAAGTCCATTATTGAGAGTTTTGGTGATGGAGGGAGAGCTTGCATAACAAGTAGAGTTTATCCTTCATTGGCTATAGAAAAAGATGCACATCTTTATGTGTTCAACAATGGAAGCCAGAGTGTGGTTATCTCAAAACTTAATGCTTGGAGTATGAAGCAAGCAGAGTTTAGCCATGAGGAAAATATAAGCTGTGCCTAA 1548 0.3398 MYYKGVYHLFYQHNPYAATFGDRIIWAHSVSYDLISWIHLNHAIEPSEPYDINSCWSGSATILPGEKPAILYTGIDKNKHQVQNLAFPKNLSDPFLREWEKHPQNPVMTSPSGVEKDNFRDPSTAWHGNDGKWRVIIGAQNGDEGKTILYQSDDFLNWTVNPNPFFATDDTGVCECPEFFPVYINSTNGVDTSVENQSVRHVLKISYIRIQHDYYFVGKYVSEKEKFTPDVEFKGTSSDLRFDYGKFYASKSFFDYAKNRRILWGWVNESDTTQDDIEKGWAGLQTIPRQVWLDKSGKRLMQWPIEELENLRDKQISITEQKLESGSTLEVLGITASQVDVEVLFELPELESGEWLDPSEVDPQLLCSKQYESRSGKIGPFGLLALASKDLTEQTAVSFQIYRAPNRYICLMCSDQSRSSLRQDLDKTTYGTIFDIDANLKTISLRSLIDKSIIESFGDGGRACITSRVYPSLAIEKDAHLYVFNNGSQSVVISKLNAWSMKQAEFSHEENISCA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03293 515 Gene3D - 318 501 - -
Car04g03293 515 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 510 - -
Car04g03293 515 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 1 510 - -
Car04g03293 515 Pfam Glycosyl hydrolases family 32 C terminal 307 500 IPR013189 -
Car04g03293 515 Gene3D Glycosyl hydrolase domain; family 43 1 317 IPR023296 -
Car04g03293 515 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 304 IPR013148 -
Car04g03293 515 SUPERFAMILY Arabinanase/levansucrase/invertase 1 305 IPR023296 -
Car04g03293 515 SUPERFAMILY Concanavalin A-like lectins/glucanases 304 503 IPR013320 -
Car04g03293 515 SMART glyco_32 1 461 IPR001362 GO:0004553|GO:0005975
Car04g03293 515 CDD GH32_Fruct1-like 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03293 Car-Chr4 61442051 61445541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03293 1 509 Glycoside Hydrolase AT1G55120 55.491 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03293 - K01193 gmx:100806220 873.618