Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03289 ATGGAGCAAAGCAGCAAGAAGTTCAAAAGGGTATGTGTCTTCTGCGGCAGCAACTCCGGCAACCGACAAGTTTTCAGTGACGCCGCCATTGAATTAGCCAATGAACTGGTTAAAAGGAACATAGACTTGGTGTATGGTGGAGGAAGTGTTGGACTGATGGGCTTAATATCTCAGAAAATGTATAATGGTGGCTGCCATGTTCTCGGGATTATTCCAAAAGCTCTCATGCCTCATGAGATATCTGGTGAAACAGTTGGTGAAGTAAGAATTGTTTCAGATATGCATGAGAGAAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTATTGCACTCCCTGGAGGATATGGAACTATGGAAGAGCTTCTGGAGATGATAACTTGGGCCCAACTTGGAATTCATAAAAAGCCGGTTGGCCTATTGAATGTTGATGGTTACTATAACTTTTTGCTTGCATTATTTGACAATGGTGTTGAAGAAGGGTTCATTAAGCCCGGTGCTCGGAATATAGTTGTCTCAGCTTCATCAGCCAAAGAACTTATGATGGAGATGGAGCACTACTCTCCTTCCCATGAGCATGTAGCCCCTCATGAGAGCTGGCAGATGAAGCAATTAGGTAATTATCCAGGACAAGAAAATGCAGAATGA 645 0.4326 MEQSSKKFKRVCVFCGSNSGNRQVFSDAAIELANELVKRNIDLVYGGGSVGLMGLISQKMYNGGCHVLGIIPKALMPHEISGETVGEVRIVSDMHERKAAMAQEADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNFLLALFDNGVEEGFIKPGARNIVVSASSAKELMMEMEHYSPSHEHVAPHESWQMKQLGNYPGQENAE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03289 214 TIGRFAM TIGR00730: TIGR00730 family protein 9 186 IPR005269 GO:0009691|GO:0016787
Car04g03289 214 SUPERFAMILY MCP/YpsA-like 7 186 - -
Car04g03289 214 Pfam Possible lysine decarboxylase 53 183 IPR031100 -
Car04g03289 214 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 6 204 - -
Car04g03289 214 Gene3D - 7 202 - -
Car04g03289 214 PANTHER LOG FAMILY PROTEIN YJL055W 6 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03289 Car-Chr4 61406253 61409370 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03289 K22522 - gmx:100785484 385.185