Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03278 ATGAAGCTTTGGTGTTGTCTATGCTTCAACgaagaagaaaaggaagaagaagacgaagaGGTAAAACGTAATCTTGTTATGAAGAACGACGAGGACATTATCGGAAACGTtgctgatgacgatgatggtgatgatgatgaAGCTGTTCCTAGAATTTACGAGGCTAGATTTCTTGCACAATTTGGAAGTGGTGCGTTTCGTTATCGGCCAGCCACACGTTTGTCGGAGGGAGAAAGTAGCTCTGTAAACGCCGATGTAGTTCCGGTTACCGGTTTTGAGAGTCCTCCCGTCGATGAAAGCCGTGATTCGTCGCACAAACGCGCCAAGTTCTACAATGAGTGTCGGTTTGATGACCCGACAACGTCTTCTAGTAATGTGAAATACTCTATGGATATTGGAGATTTTGACTCTTCTCTTCGACCTAGTAATGTCACTTGTTATGGTGATTTTGCATTGATGTGCACTGGGGATGATGGTAACGGTGTGGAAGATAGTGAAGGGAACGACAGTGACAGTTCAAAACAAGATGAAGAAGAGGTTGTCAGGATGGATCTCACGGATGACCTGTTGCATATGGTTTTCTCATTTCTGGAACAAACCGATCTCTGCAGAGCCGCCAGAGTGTGTAAGCAGTGGCGAATTGCTAGCACCCATGAAGATTTCTGGAAGAGTTTGAATTTTGAAGATCGGAACATATCTGTAGAGCAATTTGAGGACATGTGTAGGCGTTATCCAAATGCTACAGCAATGAGCATATCAGGACCGTCCATTTATTTGCTGGTCATGAAGACAATTTCTTTGTTAAGGAATCTTGAGGTTTTAACATTAGGAAGAGGACAGATAGCAGATGCTTTTTTTCTTGCTCTACCTGATTGTTCTATGTTGAAAGAGTTGAATATCAATGATTCTACACTTGGCAATAGTATTCAGGAGATATCTGTCGTACATGAGAGATTGTGTCATCTTAAACTAACAAAATGTCGTGTCATGCGAATACAAGTCAGGTGCCCACAACTTAAAACTATGTCATTGAAGCGCAGTAACATGGCACAGGTCGTGCTTAATTGCCCTCTTTTGCTTGAACTTGATATAGGCTCTTGCCACAAACTTCCTGATGCTGCTATTCGCGCTGCTGCAACTTCATGCCCTCAACTAGTGTGGCTGGACATGCGTAACTGTTCTTGTGTCAGTGATGAAACACTGCGTGAAATAGCACAGCATTGTCCTAATCTTGGTTTTCTTGATGCATCATATTGCCCAAACATATCTTTGGAGTCTGTTCGACTCCATATGTTGACAGTTCTAAAGCTTCATAGTTGTGAAGGCATCACTTCTGCATCAATGGCTGCAATAGCTCATAGTTCTATGTTGGAGGTTTTGGAGCTTGACAATTGCAGCCTATTAACTTCGGTGTCATTGGATCTTCCACGATTGAACAATATTAGATTGGTGCACTGTCGCAAATTGGCAGATTTGAACTTGAGGGCTATATCACTTTCTTCTATACAAGTGTCTAACTGCCCTGTACTCCACAGAATCAACATCACTTCAAATTCACTTCAAAAAATAGCATTGCAAAAGCAGGATAGCTTAACTACATTAGGACTGCAATGTCAGTCTTTACAAGAAGTGGACCTCTCTGAGTGTGAATCTTTGACAAACACTATATGTGATGTTTTTAGTCATGGTGGGGGATGCCCTATGTTGAAATCACTAGTTCTTGATAATTGTGAGAAGTTGACTTCAGTTTGCTTCATCAGCACCTCATTAATAAGTCTTTCGCTTGGTGGATGTCGAGCGATTACTACTCTTGAGCTAACATGCCCTAATCTTGAGAAGGTCATTTTGGATGGCTGTGATCATCTGGAAAGAGCTTCATTTTGCCCTGTTGGTCTTCGATCTCTAAATTTAGGAATATGTCCAAAATTAAATGTACTTCGCATTGAAGCAATGTTAATGGTCTCACTTGAGTTGAAAGGATGTGGCGGACTGTCTGATGCATCCCTTAATTGTCCTCTCTTGACATCTCTGGATGCTTCCTTTTGCAGCCAACTCACTGATGAATGCTTGTCTGCAACAACCCGTGCATGTCCAATAATTGAGTCATTAATATTGATGTCATGCCCATCTATTGGGTTAGATGGACTCTGTTCCCTGCGTTGGCTCCCAAATTTAACTCTGCTTGATTTATCATACACTTTCCTGGTGAATCTGCAGCCTGTTTTTGAGTCTTGTTCACAGCTAAAGGTGTTAAAGTTGCAGGCATGCAAATATCTCACCGACTCGTCACTTGAACCTCTCTACAAGGGGGGTGCTCTACCAGCTCTTGAGGAGTTGGACCTGTCTTATGGAACTTTGTGTCAGAAAGCGATAGAAGAGCTCCTTTCTTGCTGCACACACCTTACTCGTGTGAGTTTGAACGGCTGTGTGAATATGCATGATTTAAACTGGGGGTACAGTCAAGGGAAGATTCCTCATTTGCCTGGCATAAGCGTCCTATCCATTGCAAGTTCCTATGAGAATATTGATGTGTCAAGCGAGCAACCCACCCGATTACTTCAGAACCTTAACTGTGTGGGTTGTCCAAATATTAGGAAGGTTTTCATCCCATCAACAGCACATTGTTCCCATTTATTGTTTTTAAACCTTTCTCTGTCAGCTAATTTGAAGGAAGTTGATGTAGCTTGTCTCAACCTATGCTGGCTTAATTTAAGCAACTGTTCCTCACTTGAAGTTTTGAAGCTAGAGTGCCCGAGATTGACAAATCTATTCCTTCAGGCATGCAATATTGATGAGGAAGCTGTTGAAGCTGCTATATCAAAATGTACTATGTTGGAGACTCTTGATGTTCGCTTTTGTCCTAAGATAAGCTCAATGAGCATGGGAAGTTTTCGTGCCGCGTGTTCTAGTTTGAAGCGTATATACAGCAGTTTGACAACTTCATCAATGTGA 2952 0.4119 MKLWCCLCFNEEEKEEEDEEVKRNLVMKNDEDIIGNVADDDDGDDDEAVPRIYEARFLAQFGSGAFRYRPATRLSEGESSSVNADVVPVTGFESPPVDESRDSSHKRAKFYNECRFDDPTTSSSNVKYSMDIGDFDSSLRPSNVTCYGDFALMCTGDDGNGVEDSEGNDSDSSKQDEEEVVRMDLTDDLLHMVFSFLEQTDLCRAARVCKQWRIASTHEDFWKSLNFEDRNISVEQFEDMCRRYPNATAMSISGPSIYLLVMKTISLLRNLEVLTLGRGQIADAFFLALPDCSMLKELNINDSTLGNSIQEISVVHERLCHLKLTKCRVMRIQVRCPQLKTMSLKRSNMAQVVLNCPLLLELDIGSCHKLPDAAIRAAATSCPQLVWLDMRNCSCVSDETLREIAQHCPNLGFLDASYCPNISLESVRLHMLTVLKLHSCEGITSASMAAIAHSSMLEVLELDNCSLLTSVSLDLPRLNNIRLVHCRKLADLNLRAISLSSIQVSNCPVLHRINITSNSLQKIALQKQDSLTTLGLQCQSLQEVDLSECESLTNTICDVFSHGGGCPMLKSLVLDNCEKLTSVCFISTSLISLSLGGCRAITTLELTCPNLEKVILDGCDHLERASFCPVGLRSLNLGICPKLNVLRIEAMLMVSLELKGCGGLSDASLNCPLLTSLDASFCSQLTDECLSATTRACPIIESLILMSCPSIGLDGLCSLRWLPNLTLLDLSYTFLVNLQPVFESCSQLKVLKLQACKYLTDSSLEPLYKGGALPALEELDLSYGTLCQKAIEELLSCCTHLTRVSLNGCVNMHDLNWGYSQGKIPHLPGISVLSIASSYENIDVSSEQPTRLLQNLNCVGCPNIRKVFIPSTAHCSHLLFLNLSLSANLKEVDVACLNLCWLNLSNCSSLEVLKLECPRLTNLFLQACNIDEEAVEAAISKCTMLETLDVRFCPKISSMSMGSFRAACSSLKRIYSSLTTSSM 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03278 983 SMART fbox_2 185 225 IPR001810 GO:0005515
Car04g03278 983 Pfam F-box-like 187 227 IPR001810 GO:0005515
Car04g03278 983 Gene3D Ribonuclease Inhibitor 821 981 IPR032675 -
Car04g03278 983 Gene3D Ribonuclease Inhibitor 175 443 IPR032675 -
Car04g03278 983 PANTHER OS10G0396666 PROTEIN 98 942 IPR044703 GO:0010252|GO:1905393
Car04g03278 983 SUPERFAMILY L domain-like 287 644 - -
Car04g03278 983 Gene3D Ribonuclease Inhibitor 645 739 IPR032675 -
Car04g03278 983 Gene3D Ribonuclease Inhibitor 740 820 IPR032675 -
Car04g03278 983 SUPERFAMILY RNI-like 661 975 - -
Car04g03278 983 Gene3D Ribonuclease Inhibitor 444 644 IPR032675 -
Car04g03278 983 MobiDBLite consensus disorder prediction 158 177 - -
Car04g03278 983 ProSiteProfiles F-box domain profile. 179 225 IPR001810 GO:0005515
Car04g03278 983 SMART LRR_CC_2 356 381 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 475 500 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 917 941 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 697 722 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 429 454 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 608 633 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 671 696 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 566 596 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 942 977 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 538 562 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 798 838 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 382 407 IPR006553 -
Car04g03278 983 SMART LRR_CC_2 745 770 IPR006553 -
Car04g03278 983 SUPERFAMILY F-box domain 184 235 IPR036047 GO:0005515
Car04g03278 983 PANTHER OS10G0396666 PROTEIN 98 942 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03278 - - gmx:100782842 1449.11